Gene Rpal_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0792 
Symbol 
ID6408445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp830159 
End bp831148 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content70% 
IMG OID642710705 
ProductL-threonine-O-3-phosphate decarboxylase 
Protein accessionYP_001989825 
Protein GI192289220 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01140] L-threonine-O-3-phosphate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCACG GCGGCGATCT CACAGCGGCG ATGGCACGGC ACGGCGGCGA TGCCGCCGAC 
TGGCTCGATC TCTCCACTGG CATCAATCCG CGGCCCTGGC CGACTCCGGA TATCGCTGCG 
GATGCGTGGC TGCGTCTGCC GTCGCAGGCC GACGAGACCG CGCTGTGCGA TGCTGCGCGC 
CTGGCCTACG AGGTGCCCGA TGAGTCCGGC ATCGTCGCCG CTGCCGGCAC CCAGGCGCTG 
ATCCAATGGC TGCCGTATCT TGCCGCACCT GGCGGCGTTG CGATCGTCGG GCCGACTTAC 
GCGGAGCACG CGTTGGCTTG GCGTAACGCT GGGCGCGAGC TGGTCGGCAT CGCTTCGCTC 
GATGACATTC CGGAGCAGGC CCGCCACGCG GTCGTGGTGA ATCCGAACAA TCCCGACGGC 
CGCGTCGTCG CACCAGACAC CTTGCGCCGC GCAGCCGCGC AACTGCGCCG TCGCGGCGGC 
TGGCTGGTGG TCGACGAAGC CTTCGCCGAC GTTGATCCGT CGTTCAGTGC GGCATCGCTC 
ACGCCCGAGC TGCCGATCGT CGTGTTGCGC TCGTTCGGCA AGTTCTACGG CCTTGCCGGC 
GTCCGGCTCG GATTTGCGAT CGCGGGTGAG GCGACTGCTC GGAGGATCGC ATTGGCGCTC 
GGGCCGTGGA GCTGTTCCGG GCCGGCGCTG CGGATCGGTG CCGCGGCGCT GCGCGATCAA 
GCGTGGACGA TCGAAACCCG CGACGAACTG CGCGAACAGG CGACGCGGCT CGACGACGTG 
CTGCGCGTCG GCGGACTCGA AATCGTCGGC GGAACGCCGC TGTTCCGGCT GGCGCGTCAC 
GCCGAGGCAC ATCGGTTGCA CGAGGCGCTG GCGCAGCAGC GGATCTGGTG TCGCAGGTTC 
GATTGGGCCG ACGATCTGCT CAGGTTCGGC CTGCCTGCCG ACGCGGCCGG GCTCGATCGG 
CTCGCAGCCG CGCTCGCCGC GCCCTTGTAG
 
Protein sequence
MKHGGDLTAA MARHGGDAAD WLDLSTGINP RPWPTPDIAA DAWLRLPSQA DETALCDAAR 
LAYEVPDESG IVAAAGTQAL IQWLPYLAAP GGVAIVGPTY AEHALAWRNA GRELVGIASL 
DDIPEQARHA VVVNPNNPDG RVVAPDTLRR AAAQLRRRGG WLVVDEAFAD VDPSFSAASL 
TPELPIVVLR SFGKFYGLAG VRLGFAIAGE ATARRIALAL GPWSCSGPAL RIGAAALRDQ 
AWTIETRDEL REQATRLDDV LRVGGLEIVG GTPLFRLARH AEAHRLHEAL AQQRIWCRRF 
DWADDLLRFG LPADAAGLDR LAAALAAPL