| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0787 |
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| Symbol | cobN |
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| ID | 6408440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 822333 |
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| End bp | 826082 |
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| Gene Length | 3750 bp |
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| Protein Length | 1249 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710700 |
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| Product | cobaltochelatase subunit CobN |
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| Protein accession | YP_001989820 |
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| Protein GI | 192289215 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
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| TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCTGA AGCTCGACAC CAGCGTCAGC ATCGACGACG GCGATGTCGC GCGCGATCTG
CAGCAGTCGA CGGCCGATAT CGTGGTGTTG TCGGCGGCTG ATAGCGATCT GGCGGCATTC
GGCGCAGCGC GGGCCGGGAT GCCGGACGAC TATCCGACGC TCCAGCTCAC CAATTTTCTG
GCGCTTGGCC ATCCTGCTTC GGTCGACCTC TATGTCGAGC GCACGCTGGC GAAGGCCAAG
CTCGTCATCC TGCGGATGCT CGGTGGCGAG GCCTACTGGC CGCACGGCGT CGACAGTTTG
CGGCGCGATG CGCTGGCACG TGGCGCGCAG TTCGTCTGCA TTCCGGGCGA GATGGAGTGG
AATGCGGAGC TCGCGGCGCG CGGTACTGCC GATCTCGACG ACGCTCACGC GCTGTGGCGC
TATTGCAGCG AGGGCGGCGT CGACAACATC CGCCTGGCGC TGCGGTACGC CGCCTGGATG
ATCCTGCGCG ACGATTGCCC GCCGCCGGCG CGGCCGATGC CGGCCGCAGG GTTTTGGCCG
GCCGAGCCGC CGTCATCGCC GCGTCGCCGC GCGCTGGTGA TCTTCTATCG GGCGCTGGCG
GCGAGCGGTG ATACCGCGGC GATCGCGGCG CTGCGTGATG CGCTGACCGC CCGCGGCCTC
GATCCCGTCT GCGTCTTCGT CACCAGCCTG AAGGATGCGA GATCGATCGC GTTTCTTCGC
AGCGTGCTGA CCGCGACGCC GCCCGACGTC ATCGTCAACG CCACGGCGTT CGCGACCGCC
ACCGCAACCG ACGAGTCCGG CGTCCTCGCG TCCGCAGACT GTCCGATCCT TCAGGTGGCG
CAGGCCGGAG TGACGCGCGA GCACTGGGAG CAATCCGGCC GTGGCCTCAA TCCGCGCGAC
CTCGCCATGC ATGTCGTGCT GCCGGAAGTC GACGGCCGCG TGTTCGCCGG CGCGGTGGCG
TTCAAGCAGC GCGGCGGCGA CGCTGAATTT GCGCCGACCG TGTATCAGCC GCTGCAGGAC
CGGATCGACG CGGTGGCGGA TCTGGCGCGG GCCTGGGTGC GGTTGCGGCA TTTGCAACGC
GATCAGCGCT GCGTTGCCAT CGTGCTCGCC AACTATCCGA ACCGCGACGG ACGGCTCGGC
AACGGCGTCG GTCTCGACAC CCCGCAATCG CTGCACGACC TGTTGTTTAC GCTGCGGACC
GAAGGTTACC TCACCGGCGA GCTACCGGCC GACACCGCCG CGCTGATGGA GAGGCTGCAG
CGCGGCCCGA CCAATGAACT GAATGACCGA GCGGCGCGGG ATGGCGGCGT GAGCTGGCCG
GTTGCGGACT ATGCGGCGGC GTTCGAGGGA TTGCCGCAGG CGGTGCGCGA CACAGTGACG
GCGCGGTGGG GGGCGCCGGA GGACGATCCA CATGTTGCGG ATGGCGTCTT TCGACTTGGC
CTGCATCGCT TCGGTAATGT TCTGGTCGGC GTGCAGCCGG CGCGCGGCTA TGCGATCGAT
CCGAAATCGA GCTTCCATGA TCCGGAGCTG CCGCCGCCGC ATCACTATGT GGCGTTCTAT
CTATGGCTGC GGCAGGCGTT CGGCGCCGAT GCGGCGATCC ATCTCGGCAA GCACGGTAAT
CTCGAATGGT TGCCGGGCAA GAGCGCCGGG CTGTCGCGCG ATTGTTTTCC GGCCGCGCTG
CTCGGGCCGC TGCCGCATCT CTATCCGTTC ATCGTCAACG ATCCTGGCGA GGGCATCCAG
GCCAAACGGC GCAGTGCCGC GGTGATCGTC GATCATCTGA CGCCGCCGAT GACCCGCGCC
GAGCTGCACG ACGAGATGGC GCGGCTGGAA GCGCTGGTCG ACGAATATGC GATGGCGGCC
GATCTCGATC CCAATCGCGC CGACGCGATC GCCGAAGACA TCATCTCGCT GGCGCGGGCG
ACGCGTCTCG ACGAAGACGT TGCGATCGAT CGCGACACTG CGACGCTCGA TGCGCTGCGG
GCGATCGATG CGCATCTGTG CGATCTGAAA GAGATGCAGA TCCGCGACGG CCTGCACGTG
TTCGGCCGCA CGCCGCAGGC CGCACAGCGG GATGAACTGC TGGTGTCGAT CGCGCGGCTG
CCGCGCTCGG AGCTGAAGCC GCAGGATGCG TCGCTGCATC GTGCGCTGGC ACGAGACCTC
GGACTGACGG CTAGCGACGG AGCCGAATTC GATCCGCTGA CCCGTGACCT TGCGACGCCT
TACATCGGCG CCCGCCCGGC CGTTCTCGCG GCGCTGAGCG ATCGGCCGTG GCGGACGAGT
GGCGACACCG TCGAGCGCGT CGAGATGCTG GCGCTGCAAC TGGTGTCGAC TCTTCATCAA
GCCGCCCCCT CTCCCGCGAG GGGCGAGGCT GAGCGGCCTC AGTCGCTGCC GCATACTCAG
CCTGTGCTCG ACTGGATCGC CACATCGCTG CGTCCGGCGA TCGAAGCGTC CGGCGATGCC
GAGCGCGAGG CGTTGCTGCG CGGGCTCGAT GGACGGTTCA TTCGGCCGGG GCCCTCCGGG
GCGCCGACCC GCGGCCGTCC CGACGTGCTG CCCACGGGAC GCAATTTCTT CGCAGTCGAT
GTCCGCGCGG TGCCGACGCC GTCGGCGTGG CGAATCGGCC AGCTTGCCGC CGAGCGGCTG
GTCGAGTCCT ATTGGCAGGA AGCCGGCGAG TGGCCGCGCT CGATCGTGCT GTCGGCGTGG
GGCACCGCCA ATATGCGCAC CGGCGGCGAC GACGTCGCCC AGGCGCTGGC GCTGATCGGC
GTTCGGCCGA CCTGGGAAGA CGCCACCGGC CGCGTTACCG GTTTTGCGAT TGTGCCGTTG
TCGGAGCTGC GGCGGCCGCG CGTCGACGTC ACTTTCCGCG TCTCGGGGCT GTTCCGCGAC
GCCTTCCCGG TGCAGATGGA TCTGATCGCC AGTGCGGTCG CGGCGGTGGC AGCCTTGGAC
GAACCCGCTG ACGCCAATCC GATCGCCGCG CAGGTCCGCC TCCGCAGCGA ACAATTAGTT
CAGAGCGGCG TCGATCCCGA GCTGGCGAAA AAGCAGGCCG GCGCGCGGGT GTTCGGCGCG
CGGCCCGGCA GTTACGGAGC CGGGCTGCAG GCGATGATCG ATGACGGCGG CTGGAATAGC
CGCGATGATC TTGCCGGCGC TTACCTCGCC TGGGGCGGCT ACGCCTATGG GGCGGGGCAG
GACGGCGCCG AGGCGACCGA TGCGTTCGCG GCCCGGCTGA AGGCGGTCGA TCTGGTGGCG
CAGGCCCAGG ACAACCGCGA ACACGATATT CTCGACTCCG ACGATTACTA CCAGTTCATC
GGCGGCCTCG CCGCGACGGT TGAAAGTCTG CGCGGACAGG CGCCGCGGAT CGCTCATGTC
GACACTTCGC GGCCCGAAGC GCCGCTGCCG CGGACGCTAG CGCACGAGAT CTCCCGCGTG
GTGCGGGGCC GCGCGGCTAA TCCGAAGTGG ATCCAAGGCG TGATGAGGCA CGGCTATAAG
GGTGCCTCCG AAATCGCCGC CACGGTCGAT TATCTGTTTG GCTTTGCGGC CTCGACCGAT
GCCGTCGGCA ACCGCCATTT CGACCTGCTG TTCGCCGCTT ACCTCGAAGA CGACGCGGTG
CGCCAGTTTC TGCAGGACGC CAATCCGGCG GCGCTGCGCG ATATCGTGGC CCGGTTCGAC
GAGGCCATCC GGCGCGGGCT GTGGGTGCCG CGCTCCAACC GCGCTGCCGA CCTGCTCGCC
GAAATTCTCA CTCCGAAGGA AGCTGCATGA
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| Protein sequence | MHLKLDTSVS IDDGDVARDL QQSTADIVVL SAADSDLAAF GAARAGMPDD YPTLQLTNFL
ALGHPASVDL YVERTLAKAK LVILRMLGGE AYWPHGVDSL RRDALARGAQ FVCIPGEMEW
NAELAARGTA DLDDAHALWR YCSEGGVDNI RLALRYAAWM ILRDDCPPPA RPMPAAGFWP
AEPPSSPRRR ALVIFYRALA ASGDTAAIAA LRDALTARGL DPVCVFVTSL KDARSIAFLR
SVLTATPPDV IVNATAFATA TATDESGVLA SADCPILQVA QAGVTREHWE QSGRGLNPRD
LAMHVVLPEV DGRVFAGAVA FKQRGGDAEF APTVYQPLQD RIDAVADLAR AWVRLRHLQR
DQRCVAIVLA NYPNRDGRLG NGVGLDTPQS LHDLLFTLRT EGYLTGELPA DTAALMERLQ
RGPTNELNDR AARDGGVSWP VADYAAAFEG LPQAVRDTVT ARWGAPEDDP HVADGVFRLG
LHRFGNVLVG VQPARGYAID PKSSFHDPEL PPPHHYVAFY LWLRQAFGAD AAIHLGKHGN
LEWLPGKSAG LSRDCFPAAL LGPLPHLYPF IVNDPGEGIQ AKRRSAAVIV DHLTPPMTRA
ELHDEMARLE ALVDEYAMAA DLDPNRADAI AEDIISLARA TRLDEDVAID RDTATLDALR
AIDAHLCDLK EMQIRDGLHV FGRTPQAAQR DELLVSIARL PRSELKPQDA SLHRALARDL
GLTASDGAEF DPLTRDLATP YIGARPAVLA ALSDRPWRTS GDTVERVEML ALQLVSTLHQ
AAPSPARGEA ERPQSLPHTQ PVLDWIATSL RPAIEASGDA EREALLRGLD GRFIRPGPSG
APTRGRPDVL PTGRNFFAVD VRAVPTPSAW RIGQLAAERL VESYWQEAGE WPRSIVLSAW
GTANMRTGGD DVAQALALIG VRPTWEDATG RVTGFAIVPL SELRRPRVDV TFRVSGLFRD
AFPVQMDLIA SAVAAVAALD EPADANPIAA QVRLRSEQLV QSGVDPELAK KQAGARVFGA
RPGSYGAGLQ AMIDDGGWNS RDDLAGAYLA WGGYAYGAGQ DGAEATDAFA ARLKAVDLVA
QAQDNREHDI LDSDDYYQFI GGLAATVESL RGQAPRIAHV DTSRPEAPLP RTLAHEISRV
VRGRAANPKW IQGVMRHGYK GASEIAATVD YLFGFAASTD AVGNRHFDLL FAAYLEDDAV
RQFLQDANPA ALRDIVARFD EAIRRGLWVP RSNRAADLLA EILTPKEAA
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