Gene Rpal_0783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0783 
Symbol 
ID6408436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp818772 
End bp819827 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content70% 
IMG OID642710696 
Productnicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase 
Protein accessionYP_001989816 
Protein GI192289211 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACCG ACACTCTCGT CACCTGGCAG CCGCCCTCGA TCACACCGGT CGACGCGTCG 
CTGAAAGCAG CTTTGCGAGC GCGGGTGGAC GGCAAGGCCA AGCCGCTCGG CTCGCTCGGG 
CGGATCGAGG ATCTCGCGAT CGAGCTCGCT TTGATGCGGC ATCCGGAGCC GCCGCGCGCC 
GACAACGCGG TGCTGATGGT GTTCGCTGGC GATCACGGCC TGACCGAAGA AGGCGTCTCG 
CAATATCCGT CGGCCGTGAC GGTCGCGATG GTGATGACCT ATCTGGCCGG CAAGGCCACC 
GCCAACGCAT TCGCGGCAGC CAACCATGTC GATGTCCGGG TGATCGACGC CGGCGTCGCC 
GCCGACCTGC CGAAACATCC CGACCTGATC GACGCCAAGG TGCGGATGGG AACCGGCAAT 
GCGGCGCGCG AGCCGGCGAT GAGCGTCGCC GAGGCCGGTC AGGCGCTGAA CCGCGGCGCC 
GAACTGGCGC GCGCCGAGAT CGCGGCAGGG GCCGAGGTGA TCGCGCTGGG CGAGATGGGG 
ATCGGCAACA CGGCATCCTC ATCGCTGCTG CTGCACCGGC TCGGCCCGGC GCCGCTCGAC 
CAGAGCATCG GGATTGGCGC CGGTCAGGAC GCCGACGGCA TGGCCAAGAA GAAGGCGGCG 
ATCGAAAAGG CGGCAATCCG CAGCACCGCA ACCGCGCCGC TCGAGGTGCT GGCTGAATTC 
GGTGGGCTCG AGATCGCCAT GATGGCCGGC GCTGTGCTGG GTGCTGCCTC GCAGCGCCGC 
CCGGTAATCA TCGACGGCTT TATCGCCACC GCCGCGGCGC TGGTCGCGGT GCGACTGGCG 
CCGGAAGCGC GCGACTATTG CGTGTTCGCC CACCGCTCGG CCGAACGCGG CCACGATCTC 
GCGCTGCAGG CGATGGACGC CGCGCCGCTG CTCGATCTCC GGCTGCGGCT CGGCGAAGGA 
ACCGGGGCGA TCCTCGCAGT GCCTCTGGTG CGCGCCGCCT CGCGGCTGCT CACCGACGTT 
GCCGATCTCG CCGACGTACT GGCAGGTAAG CTGTGA
 
Protein sequence
MPTDTLVTWQ PPSITPVDAS LKAALRARVD GKAKPLGSLG RIEDLAIELA LMRHPEPPRA 
DNAVLMVFAG DHGLTEEGVS QYPSAVTVAM VMTYLAGKAT ANAFAAANHV DVRVIDAGVA 
ADLPKHPDLI DAKVRMGTGN AAREPAMSVA EAGQALNRGA ELARAEIAAG AEVIALGEMG 
IGNTASSSLL LHRLGPAPLD QSIGIGAGQD ADGMAKKKAA IEKAAIRSTA TAPLEVLAEF 
GGLEIAMMAG AVLGAASQRR PVIIDGFIAT AAALVAVRLA PEARDYCVFA HRSAERGHDL 
ALQAMDAAPL LDLRLRLGEG TGAILAVPLV RAASRLLTDV ADLADVLAGK L