Gene Rpal_0744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0744 
Symbol 
ID6408397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp782343 
End bp783794 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content63% 
IMG OID642710659 
Productbenzoyl-CoA oxygenase, B subunit 
Protein accessionYP_001989779 
Protein GI192289174 
COG category[S] Function unknown 
COG ID[COG3396] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03225] benzoyl-CoA oxygenase, B subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATGA ACATCATGCA CGTCGACTAC TCGACCAAGA TCCCCAACAA CGTCGATCTC 
GGTTCCGATC GCCAGGTGCT GAAGGCGCTC GAGGGCTGGC ATCCCGGCTA TATCGACTGG
TGGAATGACA TGGGGCCGGA GGGTTTCCAG GAGTCGCTGG TGTATTTGCG CACGGCGTAT
TCGGTCGACC CGCGCGGCTG GGCGAAATTC GACTACGTCA AGATGCCAGA CTATCGCTGG
GGTATCCTGC TGGCGCCGAA GGAGGAGGGC CGCGTCGTGC CGTTCGGCCA GCACTATGGC
GAGCCGGCCT GGCAGGAGGT GCCGGGCGAG CACCGTGCGA TGCTGCGCCG GCTGATCGTG
ATCCAGGGCG ACACCGAGCC GGCCTCGGTG GAGCAGCAGC GCCATCTCGG CAAGACCGCG
CCATCGCTCT ACGACATGCG CAACCTGTTC CAGGTCAACG TCGAAGAGGG CCGCCATCTG
TGGGCGATGG TTTATCTGCT GCAGAAATAT TTCGGCCGCG ACGGCCGTGA GGAGGCCGAT
GGTCTGCTCC GCCGCCGTTC CGGATCGGAC GACGCACCAC GGATGCTGGG CGCGTTCAAC
GAGGCCACGC CGGACTGGCT GTCGTTCTTC ATGTTCACCT ACTTCACCGA CCGCGACGGC
AAGATGCAGC TGCATAGCCT GGCGCAGTCG GGCTTCGATC CTCTGTCGCG CACCTGCCGG
TTCATGCTGA CCGAAGAAGC GCACCATATG TTCGTCGGCG AGACCGGCAT CAGCCGGGTG
GTGCAGCGGA CCTGCGACGC GATGCGTGTC GCCGGGATCA CCGATCCGAC CGATGTCGAC
AAGGTGCGCG CGCTCGGCGT CATCGACCTG CCGACTGTGC AGAAGAAGCT CAATCTGCAC
TACTCGCTGT CACTCGATCT GTTCGGTTCG GAAGTTTCGA CCAACGCCGC CAACGCCTTC
AATGCCGGCA TCAAGGGGCG CTTCCACGAG ACCCAGATCC AGGACGACCA CAAGCTCGAG
CGCGACACCT ATCCGGTGCT GAAGCTGGTC GACGGCGAGA TCAAGCGGGT CGACGAACCG
GCGCTCACCG CGCTCAACAT GCGGCTGCGC GACGATTACT CGCAGGACTG CGTCAAGGGC
CTGTTGCGCT GGAACAAGGT GATCACCACT GCCGGCTACG ATTTCCAGCT GAAGCTGCCG
CACGTCGCAT TCCATCGCCA GATCGGCGAG TTCAAGGACG TCGAAGCGAC ACCGGACGGC
GTGCTGATCG ATCCGGCGAC CTGGGCCAAG CGGCGCTACG AATGGCTGCC GTCGACCGAC
GACGGAGAGT TCATCGCCTC GTTGATGGTG CCGGTGTCGG AGCCCGGGCA GTACGCGTCG
TGGATCTCGC CGCCGAAGGT CGGCATCGAC AATCGCCCCG GCGATTTCGA GTACGTCAAG
ATCGAGACCT GA
 
Protein sequence
MNMNIMHVDY STKIPNNVDL GSDRQVLKAL EGWHPGYIDW WNDMGPEGFQ ESLVYLRTAY 
SVDPRGWAKF DYVKMPDYRW GILLAPKEEG RVVPFGQHYG EPAWQEVPGE HRAMLRRLIV
IQGDTEPASV EQQRHLGKTA PSLYDMRNLF QVNVEEGRHL WAMVYLLQKY FGRDGREEAD
GLLRRRSGSD DAPRMLGAFN EATPDWLSFF MFTYFTDRDG KMQLHSLAQS GFDPLSRTCR
FMLTEEAHHM FVGETGISRV VQRTCDAMRV AGITDPTDVD KVRALGVIDL PTVQKKLNLH
YSLSLDLFGS EVSTNAANAF NAGIKGRFHE TQIQDDHKLE RDTYPVLKLV DGEIKRVDEP
ALTALNMRLR DDYSQDCVKG LLRWNKVITT AGYDFQLKLP HVAFHRQIGE FKDVEATPDG
VLIDPATWAK RRYEWLPSTD DGEFIASLMV PVSEPGQYAS WISPPKVGID NRPGDFEYVK
IET