Gene Rpal_0739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0739 
Symbol 
ID6408392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp776455 
End bp777438 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content68% 
IMG OID642710654 
Product4-hydroxybenzoyl-CoA reductase, beta subunit 
Protein accessionYP_001989774 
Protein GI192289169 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID[TIGR03195] 4-hydroxybenzoyl-CoA reductase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCT TGAATGCGTT GAATTTGCTT CGGCCTGGCT CGGTGGACGA AGCGATCGCC 
GCACTGCTGG CGCACCCGGG CGGACGGCTG CTCGGCGGCG GCACGGATCT TCTGGTCAAC 
ATGCGGCGCG GTGTGACGCA GCCGGAGACG CTGATCGACA CTACCGGCAT TGCCGAGATC 
AAGCAGCTCG TCGCCGATGG CAGCGGTCTG ACCATCGGCG CGGGTGTCAC CCTGGCGAGT 
CTTGCCGCCG ATGGCCTGGT TGCCGCGCGC TATCCGGCGC TGAGCGAGGC TGCGCGTGCC 
GTAGCGGGAC CCGGTCACCG CAAACTGGGC ACCGTCGGCG GCAATCTCTG CCTCGACACC 
CGCTGCATCT ACTACAATCA AAGCGAATGG TGGCGGCGGG CGAATTCCTA CTGCTTGAAG 
AACCGCGGCG AGATCTGTCA TGTCGCGCCG AAGGGCAGTC GTTGCCACGC TGCCTTCAGC 
GGTGATCTGG CACCTGCGCT GCTGGTGCTC GGCGCCGAGG TGGAGATCGC TGGACCGGAC 
GGTCGGCGCC GCATCCCACT CGGCGAGCTG TATGTCGAAG ACGGCCGGGC GCATCTTGCG 
CTGCGGCCGG GCGAGGTCGT GGTCACGGTG CGGCTGCCGG CCGACCCGTT TGCGTCGCGC 
TACGTCAAGG TGCGGCAGCG CGGCGCGATC GACTATCCGC TCGCCGGAGT CGCTGTGGCG 
CTGGCGCGGT CGGGCTCCAG AATCGCGCAG CTTCGCATTG CACTGACCGG GACCAATTCG 
CGGCCGTTTC TGCTCGCGGA GACGGCCGCC TTCGCGCAAC GATCGCTCGA TGACGCGCTG 
CTCCGCGAGA TCGATCGGCT GGTGCAGAAG CAGGTGCAGC CGATGCGGAC GACGCTGATG 
CCGGCCAACT ACCGGCGCGT CGTTGCGGCG GCTCTGGCCA GCCGCATCAC GGCCGAGCTG 
TTCGCCTCAC TGGCGCCGGC GTAG
 
Protein sequence
MTALNALNLL RPGSVDEAIA ALLAHPGGRL LGGGTDLLVN MRRGVTQPET LIDTTGIAEI 
KQLVADGSGL TIGAGVTLAS LAADGLVAAR YPALSEAARA VAGPGHRKLG TVGGNLCLDT 
RCIYYNQSEW WRRANSYCLK NRGEICHVAP KGSRCHAAFS GDLAPALLVL GAEVEIAGPD 
GRRRIPLGEL YVEDGRAHLA LRPGEVVVTV RLPADPFASR YVKVRQRGAI DYPLAGVAVA 
LARSGSRIAQ LRIALTGTNS RPFLLAETAA FAQRSLDDAL LREIDRLVQK QVQPMRTTLM 
PANYRRVVAA ALASRITAEL FASLAPA