| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0734 |
|---|
| Symbol | |
|---|
| ID | 6408387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 769550 |
|---|
| End bp | 770410 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642710649 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001989769 |
|---|
| Protein GI | 192289164 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTTA TTCTGATCCA GGCGCTGAAC GGCCTACAGA CCGGGCTGGT GATCTTCCTG
GCCGCCAGCG GCCTGACCCT GGTGTTCGGC ATTCTCGGCG TCATCAATCT CTCGCACGGC
TCGTTCTACA TGCTCGGCGC CTATTTGGCG CTCTCGCTGA CCGGCATGTT CGGCGACGTC
TTTCTGGCGC TGATCGCCGG CATCCCGCTC GCCTTCCTGC TTGGTCTGGC GATCGAGTGG
CTGTTCATCC GCCATCTCTA CGACCGCGAC CACCTGCAGC AGGTGCTGCT GACCTTCGCG
CTGATCCTGA TCTTCAATGA ATTCCAGCAA GTGGTGTGGG GATCGTATCC GCACTCGATC
CCGGCGCCGA GCTATCTGGC CAACAGCGTC CGGCTCACCG AAGGTCTGAG TTACCCGGTC
TATCGATTGG CGCTGATGGC GATCTGCGTC GCGCTGGCGA TTGCGATGGC GCTGGTGATC
CAGAAGACCC GGATCGGCCG CCTGATCCGT GCCGCCGAGT CCAATCGCGA GATGGTCGAA
GCGCTCGGCT TCGACTCGCG GCTGATCTTC CGGATGGTGT TCGCCACCGG TGTCGCACTC
GCCGCCACCG CCGGCATGCT CGCGGCCCCA ATCGAGAGCG CCTATCCAGG CATCGGAGAT
CGCGTGCTGA TCGTCTCGTT CGTGGTTGTG GTGATCGGCG GCATCGGTTC GGTACGCGGT
GCGTTCATCG GATCGTTGCT GATCGGCATG GCCGACGCCT TCGGCAAGGT GTTCCTACCG
CAGTTCTCCA GCATCATCAT CTACGCGTTG ATGGCGCTGG TGCTGGTGAT ACGCCCGGCC
GGGCTGTTCG GGCGGGCATG A
|
|---|
| Protein sequence | MSLILIQALN GLQTGLVIFL AASGLTLVFG ILGVINLSHG SFYMLGAYLA LSLTGMFGDV
FLALIAGIPL AFLLGLAIEW LFIRHLYDRD HLQQVLLTFA LILIFNEFQQ VVWGSYPHSI
PAPSYLANSV RLTEGLSYPV YRLALMAICV ALAIAMALVI QKTRIGRLIR AAESNREMVE
ALGFDSRLIF RMVFATGVAL AATAGMLAAP IESAYPGIGD RVLIVSFVVV VIGGIGSVRG
AFIGSLLIGM ADAFGKVFLP QFSSIIIYAL MALVLVIRPA GLFGRA
|
|---|
| |