| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0733 |
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| Symbol | |
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| ID | 6408386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 767760 |
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| End bp | 769553 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642710648 |
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| Product | ABC transporter related |
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| Protein accession | YP_001989768 |
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| Protein GI | 192289163 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATGC TGACCCGCCC CAACCTCGTC GTCGTCCTGT TCTTCACGCT GCTGCTCGGC
TGCCTGCTGG CGCTGCCGTT CGTCGCCGGG CCGTATCCGG TCAAGCTGAT GACCCGGATC
GTGATCATCG CGACCTTCGT GCTTAGCCTC GACCTCTTGA TCGGCGTCAC CGGCCTCGTC
AGCTTCGGTC ACGCCGCCTT CTTCGGCTGC GGCGCCTATG CGGTGTATTT CGTCTCGCCG
GAAGCGGAAG CCGCCAACGT CATCGTCGCG CTCGGCGCCG GGCTACTGGC CGGGGGACTT
GCCGCGCTGG TGGTCGGCGC GTTCGCGACA CTGACGCGCG GCTTCTATTT CATCATGGTG
ACGCTGGCGG CCGGCCAGAT GTTGTTCGCG CTGTTCCATG ACACCGACAT CGCCAAGGGC
TCGGACGGCG CCTACATCAA CGTCAAGCCC GAGCTGACGC TGGCCGGCTT GACGCTGCTC
GATTTCTCCG ACCGCCGGCA GTTCTATTAC GTCTGTGTCG TCGTGCTGAT TGCCGCCTAT
GGCCTGCTGC TGGCGCTGGT GCGGTCGCCG TTCGGCCGGG TGCTGCAGGG CATCCGCGCC
AACGAGGTGC GGATGAGCTC GCTCGGCTAC GACACCTATC GCTACAAGCT CGCCGCCTTC
ACGATTGCCG GGATGGTGGC AGGGCTCGCC GGTGCGCTGT TCGCATCGAT CGACGGCTTC
GTCACCCCCG ACCTGCTCAA CTGGCATCAA TCCGGCCTTG CGATCATGAT GGTGGTGCTG
GGCGGCGCCG GTACGCTGTT CGGCCCAATC CTCGGCGCGC TCGCCTATTC GTCGCTGGAA
GAACTATTGA AGACCGCTAG CATCGTCGGC TCTTTTGTCG CCGACCATTG GCGGCTCGGC
ACCGGCGCGA CGCTGATCGC GGCCGTGCTG ATGTCGCCCG ACGGTCTCGC CGGGTTACTG
AACTGGCGGC GCAAACAGCC GCAGGCTACG CCAGCGCGGC CGCCGGCGGA CGAACCGCAG
CGCCCGGCGA AGACCGCGAA GGCACTGGCG ACCAACCATC TCAGCAAGAA CTTCAACGGC
ATCGCCGCGG TCAGCGACGT CACCGTGACG TTCGAGCCCA ACAAGGTTCA CGCCATCATC
GGCCCGAACG GCGCCGGCAA GACCACCTTC ACCAATCTAT TGTCGGGCGC ACTGCCGGCC
AGCGCCGGCA GCGTGCAGAT CGACGAGCTC GACGTCACCG GCTGGCCGGC CTACCGGATC
GCGCGCGCCG GCCTCGGCCG CTCCTATCAG CGGACCAACA TCTTCCCGCG CTTCACGGTA
CGCGAGAACT GCGCGCTCGC CGCTCAGCTC GACAAGGGCG CGCTGTGGCG GCTGCGCGAT
GCGCCGTATC GAGCGCGCGA ACAAGCCGCG GTCGACCGCG CCCTGCGGGT CGCTGGGCTC
GCCGATCGCG GCGACACCAT CGCCGGCCGG ATGTCGAACG GCGAGCAGCG GCAGCTCGAA
ATCGCGATGC TGATCGCCTC GGGCGCCGAT CTCTTGATCC TCGACGAACC GCTGGCCGGC
ATGGGACCGG AGGAAACCCA GCGGGTGGTG GCGCTGCTGC GCGACCTGGT GCGCGACCAC
ACCGTTATCG TGATCGAGCA CGACATGGAT GCAGTGTTCG CCGCCGCCGA TACGCTCACG
GTGCTGGTGC AGGGCAAGCT GTTCGCCCGC GGCCGGCCCG ACGAAATCCG GCGCAACGAA
GCCGTGCTCG AAGCCTATCT CGGCCATCAC GCCAAGATGA AGGAGTCGGC ATGA
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| Protein sequence | MTMLTRPNLV VVLFFTLLLG CLLALPFVAG PYPVKLMTRI VIIATFVLSL DLLIGVTGLV
SFGHAAFFGC GAYAVYFVSP EAEAANVIVA LGAGLLAGGL AALVVGAFAT LTRGFYFIMV
TLAAGQMLFA LFHDTDIAKG SDGAYINVKP ELTLAGLTLL DFSDRRQFYY VCVVVLIAAY
GLLLALVRSP FGRVLQGIRA NEVRMSSLGY DTYRYKLAAF TIAGMVAGLA GALFASIDGF
VTPDLLNWHQ SGLAIMMVVL GGAGTLFGPI LGALAYSSLE ELLKTASIVG SFVADHWRLG
TGATLIAAVL MSPDGLAGLL NWRRKQPQAT PARPPADEPQ RPAKTAKALA TNHLSKNFNG
IAAVSDVTVT FEPNKVHAII GPNGAGKTTF TNLLSGALPA SAGSVQIDEL DVTGWPAYRI
ARAGLGRSYQ RTNIFPRFTV RENCALAAQL DKGALWRLRD APYRAREQAA VDRALRVAGL
ADRGDTIAGR MSNGEQRQLE IAMLIASGAD LLILDEPLAG MGPEETQRVV ALLRDLVRDH
TVIVIEHDMD AVFAAADTLT VLVQGKLFAR GRPDEIRRNE AVLEAYLGHH AKMKESA
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