| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0728 |
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| Symbol | |
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| ID | 6408381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 764053 |
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| End bp | 765627 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710643 |
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| Product | benzoate-CoA ligase family |
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| Protein accession | YP_001989763 |
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| Protein GI | 192289158 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02262] benzoate-CoA ligase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCAG CCGCGGTCAC GCCGCCACCC GAGAAATTCA ATTTCGCCGA ACACCTGCTG
CAGACCAATC GCGTGCGGCC GGACAAGGCC GCCTTCGTCG ACGACATCTC GTCGCTGAGC
TTCGCGCAGC TCGAAGCTCA GACGCGGCAG CTCGCCGCCG CCTTACGCGC GATCGGGGTG
AAACGCGAAG AGCGCGTGCT GCTGCTGATG CTCGACGGCA CCGATTGGCC GGTGTCGTTT
CTGGGCGCAA TCTACGCCGG CATCGTGCCG GTCGCGGTCA ACACGCTGCT GACGGCGGAC
GACTACGCCT ACATGCTGGA GCATTCGCGG GCCCAGGCCG TGCTGGTCAG CGGCGCGCTG
CACCCGGTGC TCAAGGCGGC GCTGACCAAG AGCGATCACG AGGTGCAGCG AGTGATCGTT
TCGCGCCCAG CGGCTCCGCT GGAGCCGGGC GAGGTCGACT TCGCTGAGTT CGTCGGCGCA
CATGCGCCGC TTGAGAAGCC TGCCGCTACG CAAGCGGACG ATCCGGCGTT CTGGCTGTAT
TCGTCGGGTT CGACCGGGCG GCCGAAGGGT GTGGTGCACA CCCACGCCAA TCCGTATTGG
ACCTCGGAGC TGTACGGCCG CAACACGTTG CATCTGCGCG AAGACGACGT CTGCTTTTCG
GCGGCCAAAC TGTTTTTCGC TTACGGCCTC GGCAACGCGC TGACGTTTCC GATGACGGTC
GGCGCCACCA CGTTGCTGAT GGGCGAGCGG CCGACGCCGG ACGCGGTGTT CAAGCGCTGG
CTCGGCGGCG TCGGCGGGGT GAAGCCGACC GTGTTCTATG GCGCGCCCAC CGGCTACGCC
GGCATGTTGG CCGCGCCGAA CCTGCCGTCG CGCGACCAGG TGGCGTTGCG GCTCGCGTCC
TCGGCGGGCG AAGCACTGCC GGCGGAGATT GGGCAGCGCT TCCAGCGTCA TTTCGGCATC
GACATCGTCG ACGGTATCGG CTCGACCGAG ATGCTGCACA TCTTCCTGTC GAATTTGCCG
GGCCGGGTGC GCTACGGCAC CACCGGATGG CCGGTACCGG GTTATCAGAT CGAGCTGCGC
GGCGACGGCG GCGGTCCGGT CGCCGACGGA GAGCCGGGCG ATCTCTACAT TCACGGCCCG
TCATCGGCGA CGATGTATTG GGGCAACCGG GCCAAGAGCC GCGACACCTT CCAGGGCGGC
TGGACCAAAA GCGGCGACAA ATACGTCCGC AACGACGACG GCTCCTACAC CTATGCGGGC
CGCACCGACG ACATGCTGAA AGTCAGCGGC ATCTACGTCA GCCCGTTCGA GATCGAAGCG
ACGCTGGTGC AGCATCCCGG CGTGCTCGAA GCCGCAGTGG TCGGGGTCGC CGACGAACAC
GGCCTCACCA AGCCGAAGGC CTATGTGGTG CCGCGGCCCG GCCAGACTCT GTCGGAGACC
GAGCTGAAGA TCTTCATCAA GGATCGACTG GCGCCGTACA AATATCCGCG CAGCACGGTG
TTCGTCGCCG AATTGCCGAA GACCGCGACC GGCAAGATCC AGCGCTTCAA GCTGCGCGAA
GGTGTGTTGG GCTGA
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| Protein sequence | MNAAAVTPPP EKFNFAEHLL QTNRVRPDKA AFVDDISSLS FAQLEAQTRQ LAAALRAIGV
KREERVLLLM LDGTDWPVSF LGAIYAGIVP VAVNTLLTAD DYAYMLEHSR AQAVLVSGAL
HPVLKAALTK SDHEVQRVIV SRPAAPLEPG EVDFAEFVGA HAPLEKPAAT QADDPAFWLY
SSGSTGRPKG VVHTHANPYW TSELYGRNTL HLREDDVCFS AAKLFFAYGL GNALTFPMTV
GATTLLMGER PTPDAVFKRW LGGVGGVKPT VFYGAPTGYA GMLAAPNLPS RDQVALRLAS
SAGEALPAEI GQRFQRHFGI DIVDGIGSTE MLHIFLSNLP GRVRYGTTGW PVPGYQIELR
GDGGGPVADG EPGDLYIHGP SSATMYWGNR AKSRDTFQGG WTKSGDKYVR NDDGSYTYAG
RTDDMLKVSG IYVSPFEIEA TLVQHPGVLE AAVVGVADEH GLTKPKAYVV PRPGQTLSET
ELKIFIKDRL APYKYPRSTV FVAELPKTAT GKIQRFKLRE GVLG
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