| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0718 |
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| Symbol | |
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| ID | 6408371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 752788 |
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| End bp | 754431 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642710633 |
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| Product | cyclohexanecarboxylate-CoA ligase |
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| Protein accession | YP_001989753 |
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| Protein GI | 192289148 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR03208] cyclohexanecarboxylate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTCG ACGCCGTTCT GCTGCCGCCA CGCCGCGCCG CGAGCATCGC CGCCGGCCTG
TGGCACGACC GAACCATCAA CGACGATCTC GACGCCTGCG TGGCGCATTG TCCCGACAAG
GTCGCCCTGA CCGCGGTCCG GCTCGACGGC GGCGCGATGC GCCGCTTCAG CTACTGTGAG
CTCGCGACCC TGGCCGATCG CGTCGCGGTT GGACTGAACC GGCTCGGCGT CGGCCACGGC
GATGTCGTCG CTATGCAGCT GCCGAACTGG TGGCAGTTCA CCGTGCTGTA TCTCGCCTGC
TCCCGGCTCG GCGCGGTGCT CAACCCGCTG ATGCCGATCT TCCGAGAGCG CGAGCTGTCG
TTCATGCTGA AGCACGGCGA CGCCAAGGTG CTGGTGGTGC CGAAGAGCTT CCGCGGCTTC
GACCATGAAG CGATGGCGCG TAGCCTGCAG CCCGATTTGC CGGCTCTGCG TACGATCGTC
GTGGTCGATG GCGGCGGTGC AGACGATTTC GACACGCTGC TGACGACGCC AGAATGGGAA
AAGCAGCCGG ACGCCGCGGC GATCCTTCAA GGCAGCCGTC CTTCTCCTGA CGACATCACA
CAACTGATCT ACACCTCCGG CACCACCGGC GAGCCGAAAG GCGTGATGCA CAGCGCCAAC
ACGCTGATGG CCAATATCGT GCCCTACGCG CAGCGGCTCG CGCTTCGCGA GTCCGACGTG
ATCCTGATGG CGTCGCCGAT GGCACATCAG ACCGGCTTCA TGTACGGGCT GATGATGCCA
ATCATGCTGC GCGCCAGCGC GGTGCTGCAG GACATCTGGG AGCCGACGAA GGCGGCCGAA
CTGATCCGCA CGGAGCGCGT CACCTTCACC ATGGCGTCGA CGCCGTTCCT CACCGACCTG
ACCCGCGTGG TGAAGGAGAG CGGCGAGCCG GTACCCAGCC TGAAGACCTT CCTGTGCGCC
GGCGCGCCGA TTCCCGGGCC GCTGGTCGAA CAGGCTCAGG CCGGTCTCGG CGCCAAGATC
GTGTCGGCCT GGGGCATGAC CGAGAACGGC GCGGTGACGC TGATCAAGCT CGACGACGAC
GACAAGCTGG CCTCGACCAC CGACGGCTGC CCGCTGCCCG GCGTCGAGGT GAAAGTGATC
GACGGCGACG GCAAAGCGCT GCCGCCGAAC CAGATTGGCC GGCTGGTGGT GCGGTCGTGC
TCGAACTTCG GTGGCTATCT GAAGCGGCCG CATTGGAACG GCACCGACGC CGACGGCTGG
TTCGACACCG GCGACCTCGC CTACATGACG GCCAATGGCT ACATCCGGAT CAGCGGCCGC
AGCAAGGACG TGATCATCCG CGGCGGCGAG AACATCCCGG TCGTCGAGGT CGAGGCGCTG
CTCTACAAGC ACCCCGCCGT CGCCCAGGTC GCGATCGTCG CCTATCCGGA CGAACGGCTT
GGCGAGCGCG CCTGCGCCGT GGTGGTGCCG AAGACCGGCG CAAGCATCGA CTTCGCCGCC
ATGGTCGAGT TCCTGAAGGC GCAGAAGCTG GCGCTGCAAT ACATCCCCGA GCGGCTGGTA
GTCCGCGACG CGATGCCGGC GACGCCGTCC GGCAAGATCC AGAAATTCCG GCTGCGCGAG
ATGCTGCAGC ACAACGATCT GTAA
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| Protein sequence | MEFDAVLLPP RRAASIAAGL WHDRTINDDL DACVAHCPDK VALTAVRLDG GAMRRFSYCE
LATLADRVAV GLNRLGVGHG DVVAMQLPNW WQFTVLYLAC SRLGAVLNPL MPIFRERELS
FMLKHGDAKV LVVPKSFRGF DHEAMARSLQ PDLPALRTIV VVDGGGADDF DTLLTTPEWE
KQPDAAAILQ GSRPSPDDIT QLIYTSGTTG EPKGVMHSAN TLMANIVPYA QRLALRESDV
ILMASPMAHQ TGFMYGLMMP IMLRASAVLQ DIWEPTKAAE LIRTERVTFT MASTPFLTDL
TRVVKESGEP VPSLKTFLCA GAPIPGPLVE QAQAGLGAKI VSAWGMTENG AVTLIKLDDD
DKLASTTDGC PLPGVEVKVI DGDGKALPPN QIGRLVVRSC SNFGGYLKRP HWNGTDADGW
FDTGDLAYMT ANGYIRISGR SKDVIIRGGE NIPVVEVEAL LYKHPAVAQV AIVAYPDERL
GERACAVVVP KTGASIDFAA MVEFLKAQKL ALQYIPERLV VRDAMPATPS GKIQKFRLRE
MLQHNDL
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