Gene Rpal_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0712 
SymbolflgE 
ID6408365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp747247 
End bp748512 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content62% 
IMG OID642710627 
Productflagellar hook protein FlgE 
Protein accessionYP_001989747 
Protein GI192289142 
COG category[N] Cell motility 
COG ID[COG1749] Flagellar hook protein FlgE 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTCA CTGGCGCGCT TTCCTCGGCG ATTTCTGCGC TCAACGCGCA GAGTCAATCC 
CTGTCGATGA TCTCCGACAA CATCGCCAAC TCCGACACCA CCGGCTACAA GACTACCTCG
GCGATGTTCA GCCAGCTGGT GACGGCGTCG AGCAGCGCGA CGTCCTATGC ATCCGGTGGC
GTCACCGTAG CGGGACGCGC CAACATCAGC CAGCAGGGAC TTCTGGCCGC GACCAGCAAC
GCGACCGACG TTGCCATCCA GGGTTCCGGC TTTTTCGTGG TGTCCGACCA GACCTCCGGC
GGCACAACGT CCTATACCCG AAATGGCGCG TTCTCGATCG ACAACGCCGG CTACCTGGTC
AACAGCGGCT ATTACCTCGA AGGCTGGCGC ACCGATGCCG ACGGCAAGAT CGTCGGCGAC
GCATCGTCGG CGACACTGTC GCCGATCAAC ACCAACGTGG CCGCGACCAG CGGCAGCGCG
ACCACCAAGA CCACCTTCGC GGCCAATCTG CCGGCGGATG CCGCAACGGG CGCGACTTAT
TCGAGCTCGA TGACGGTGTA CGATTCGCTC GGCACCGCCA ACTCGATCCA AGTGACTTGG
ATCAAGACCG CGTCGAATGC CTGGACGGCG AGCTTCGCCA ATCCGACGCT GTCGTCGAGC
ACCAGCACCA CCACCGGTAC CACCTCCGGC TCGGTGTCGC TGACGTTCAA CAGTGATGGC
TCACTCGCAT CCACCAATCC CAGTCCGCCG ACGATCTCGG TGTCCGGCTG GACCAACGGC
GCTGCGAACA GCACGATCTC GCTCGATTTG GGAACGGTCG GTAAGACCAA TGGCCTTACC
CAATATGCAT CGGGTGAAGC GACGCCGACC ATCAATGTCA CCAGTATTTC GTCGGATGGC
CTGCCTTACG GCAAACTGAG CAGCATCGCG GTCGGCGACG ACGGCACGGT CAATGCCACC
TATTCTAACG GACAGACCAT CGCGATCTAC AAGATCGCGG TCGCGACCTT CAAGGATCCC
GACGGCCTGT CGGTGAACAG CTACGGCATC TATTCGGTGA CCGCGGCATC CGGTGATGCG
TCGGTGCAGA CGTCTGGCAG CAACGGTGCC GGCAAGATCT ACGGCAGCGA GCTGGAATCC
AGCACCACCG ACACGTCGAG CCAATTCGCC AGCATGATCT CGGCGCAGCA AGCCTATTCG
GCGGCCTCGC AGGTGATCAC CACAGTGAAC AAGATGTTCG ACACCCTGAT CTCGGCAATG
AGGTAG
 
Protein sequence
MSLTGALSSA ISALNAQSQS LSMISDNIAN SDTTGYKTTS AMFSQLVTAS SSATSYASGG 
VTVAGRANIS QQGLLAATSN ATDVAIQGSG FFVVSDQTSG GTTSYTRNGA FSIDNAGYLV
NSGYYLEGWR TDADGKIVGD ASSATLSPIN TNVAATSGSA TTKTTFAANL PADAATGATY
SSSMTVYDSL GTANSIQVTW IKTASNAWTA SFANPTLSSS TSTTTGTTSG SVSLTFNSDG
SLASTNPSPP TISVSGWTNG AANSTISLDL GTVGKTNGLT QYASGEATPT INVTSISSDG
LPYGKLSSIA VGDDGTVNAT YSNGQTIAIY KIAVATFKDP DGLSVNSYGI YSVTAASGDA
SVQTSGSNGA GKIYGSELES STTDTSSQFA SMISAQQAYS AASQVITTVN KMFDTLISAM
R