Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0705 |
Symbol | |
ID | 6408358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 739047 |
End bp | 741449 |
Gene Length | 2403 bp |
Protein Length | 800 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642710620 |
Product | hypothetical protein |
Protein accession | YP_001989740 |
Protein GI | 192289135 |
COG category | [R] General function prediction only |
COG ID | [COG5610] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTTG TTTCTATCGA TCACACACCA CGCGCTCAGA ATCGTATCGC CTGGTCGTTT GATGTTTTCG ATACATTTCT GATCCGCGCC TGCACCACGC CGACCGGCGT ATTCGAGCTG ACTTATCAGC TGTCGCGTGT TTCGGATCTG TGTCCGAACA TGTCTGAGCA TTTCGTCCAG CATCGTATCT TGGCCGAGTC GCGTGTGCGC GAGGCGGCGC GTTCGCGCGG AGAGGCGACA GAGATCAACA TCGACCAGAT CTACGCGCGC TTCCCCTTCC GGCTGTTCGG ATTGGAGCGC GAGGATCTCA ACCACCTGAT CGAGGCCGAG TTCAGCGCCG AACTCGAACT GTGCCGAATC AATCCGGACA TGCTCGAGCA ATATCGCGCG CGGCGCCGCG CCGGGAATCG CGTCGGCTTC ATCTCCGACA CCTATTGGAA TACCGAGCGG CTGGGACGGC TGCTGCGCGC CTGCAGTCCG GGGCTGACGT GGGATTTCCT CTACGCATCG TGCGATCACG GCAGCAGTAA AGGTGAGGAT CTGTTCGCGA CCTATCTGCG CCAACAGGGC GTCGACGCGA GCTCGGCATA CCATGTCGGC GACAATGAGC ATGCCGACAT TCGCGGCGCG AAGCGCCATG GCATCCGGCC ACGGCACTAT CCGCAGGCCG GGCCGCGGCT CACAACGCGG CTGCTGCGCG AAGATTTGCT GCAGCAGCTG ATGTTCAAAG GACAGCCGAC GAGGCTCGAC CGCGGCGCGC GTACACTGCG GCGGATGGTG GCGGCGCGTA GTGCCGAACA ATCTGCGGCG CATCATCTCG GCAGCACGGT GGTCGGACCG GTGTTGGCAG CATTCGACCA ATTCGTGGCG ACGCGCAGGG CCGACCTTGC AGGTGATGGC CGCCGTGTCG CGATCGGGTT TTTGGGCCGC GACGGCTTCC TGTCGCACCG CCTGTGGCAA CAGAGCCGCG GCGAACCGGC CGCTTATCTG GAGATCAATC GCCGGGTCAG CCTGATTGCC TCGGCCGATA CGATCGGGCC AATCTGCGAA TTGATCCGCA AGATCCCAAG GATCGACGCG GCGAAACTGC AGGACATGCT CAAAATCTTG CCGCCGGCCC TGGCGGATTT TTTTGCGCAC TGCGACGGTG GAATCGCCAC CGGCGCCGAA CTGGCTGATG CCCTTCCAAA CCTGATCGAG TCGCACGAGA TCGCAATGCT CGCGGCCAGT CTGCGCGGAC GCCTGCTCGA TTACATCCGG CAGCAGATTC CCGACCTCGA CGACTGCACC GACCTGCTGC TGGTCGATCT CGGCTATTCG GCCAGCGTGC AGAAGGCGCT GAGCCGCGTG TTCAAACTCG CCGGTCTCGG GCTGCGCGTC CACGGCTGCT ATTTGCTCGC CCTCGGCGAC GCGTGGGACG AGCTCGCCGA GGAAGACACC GTCTCGGGGC TGATCGACGA TCTGGTGCTG GCGCCGCATC TCAATCGAAC GCTGATCCGT AACGCGCCGA TCTTCGAGCA GATCTGCTGC TCGGCAGACG GCTCGGTACG CGACTATGAG GACGGTCACG TGCTCCGCGA GCCCGATCCG CGACCGGCCA CGCAGATCGA GGTGACATCC GAGATTCAGG CGGGAGTGTT GACCTACGCG TCGGCGGCAC GCGGCGTCGC CGACGAGGTT GGGCTCGATC CCTATCGGGA CCTCGGCGTC GCCGCGCGCG CGACCGCCAC GACGCTCGGC CGCCTGTTGC TGCTGCCGGA CGACGAAGAA CTGGCGCTGT TCGGCTCATT TCAGCACGAC GTCAATCTCG GCACCGATAC GCTCGCGCCC ATGATTCACA GCAACGCGAT CAGCAACCAG ATCGCGCTGC GGGGGCTGCC GGTGACCTGT GCGCTGTCGC CGCCGCCGAT GTGGATGGCG GGCAGCTTCG CTGCGGTCTC GCCGTCGCAT GCCTATCTGT ATGCGTTGTT CGGTGCTGGC CAACTTCCCG GCGAGATGGT CGGCGACCGG CCTCACGGCT CGCTCCGAAT CGGTCTGTTC GGTGCGGACG GCGCGGGATC GCTTCAGGAG GTGTCGGTGC TGCGTACTGG TTTCGGCGGC TTGCGCCTGC GCATTCCGCT GTCTGGCGCG ATGCAGATCG CCATGATCGC GGTGCCGCTG GGCCGACTCG CGCGCGAGGG CCTGATCGAC GGGGTGATGA TCCAGCGCGG AAGCACGGCC GCCGAGACGA TGCGCACCGA AGCGTTCATG CCGGTCGCCG CCGACCGCCT CAGCACGGCC GGGCTGACCC GCAGCGGACG GCACTACCTC GCTGCAGACG ACGAGGGCTG CCTGCTGATT CCGGTCGAGC CGGCGGACGG CATCACCATC TACACCGTCG CAGTGACCCC GCTCGGCTGT TAG
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Protein sequence | MSFVSIDHTP RAQNRIAWSF DVFDTFLIRA CTTPTGVFEL TYQLSRVSDL CPNMSEHFVQ HRILAESRVR EAARSRGEAT EINIDQIYAR FPFRLFGLER EDLNHLIEAE FSAELELCRI NPDMLEQYRA RRRAGNRVGF ISDTYWNTER LGRLLRACSP GLTWDFLYAS CDHGSSKGED LFATYLRQQG VDASSAYHVG DNEHADIRGA KRHGIRPRHY PQAGPRLTTR LLREDLLQQL MFKGQPTRLD RGARTLRRMV AARSAEQSAA HHLGSTVVGP VLAAFDQFVA TRRADLAGDG RRVAIGFLGR DGFLSHRLWQ QSRGEPAAYL EINRRVSLIA SADTIGPICE LIRKIPRIDA AKLQDMLKIL PPALADFFAH CDGGIATGAE LADALPNLIE SHEIAMLAAS LRGRLLDYIR QQIPDLDDCT DLLLVDLGYS ASVQKALSRV FKLAGLGLRV HGCYLLALGD AWDELAEEDT VSGLIDDLVL APHLNRTLIR NAPIFEQICC SADGSVRDYE DGHVLREPDP RPATQIEVTS EIQAGVLTYA SAARGVADEV GLDPYRDLGV AARATATTLG RLLLLPDDEE LALFGSFQHD VNLGTDTLAP MIHSNAISNQ IALRGLPVTC ALSPPPMWMA GSFAAVSPSH AYLYALFGAG QLPGEMVGDR PHGSLRIGLF GADGAGSLQE VSVLRTGFGG LRLRIPLSGA MQIAMIAVPL GRLAREGLID GVMIQRGSTA AETMRTEAFM PVAADRLSTA GLTRSGRHYL AADDEGCLLI PVEPADGITI YTVAVTPLGC
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