| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0672 |
|---|
| Symbol | |
|---|
| ID | 6408324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 713194 |
|---|
| End bp | 714375 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642710586 |
|---|
| Product | putative head morphogenesis protein SPP1 gp7 |
|---|
| Protein accession | YP_001989707 |
|---|
| Protein GI | 192289102 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2369] Uncharacterized protein, homolog of phage Mu protein gp30 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.638572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTCA CGAGGCGGCA GACGTTGGCG ATGCTCGCGC AGCTCGCCGC CGTGAAGCGC
GGCTTTCAGA CGCCGCCCGA GATCCTCGAC TACTTCCGCG ACAAGAACCT CAAGCCTGCG
TTCTCATGGC TCGACGTGTG GGGCGAAGAG CATGCGCACG CCTTCACTGT GGCGGGCGTC
ACCGAGACCC GCGTGCTGAC CGAGTTCAAG GAGGCGATCG ACAAGGCGCT GACCGCCGGC
ACCGGTTTCG AGGCATTTAA AGCCGACATG CAGGCCCGTT TAACGCCGCG TGGATGGTGG
GGCCCGAAGG TCGTCTCCGA TCCGACCGGC AAGTGGAAGG ACAAGACCGT CGACTTCACC
AAGCCCGGCC GGCTGGAGAC CACGTTCTGG TCGAACGTCC GCAGCGCGCG CGCAGCCGGC
CAGTGGAATC GCATCCAGCG CACGAAGGAG TCGCGACCCT ATCTCGTCTA CGTTCGCTCG
GTTGCGGAGC GGAAGCGGCC CGAACATCTC GCGTGGGTCG GCACCATCAA GCCGGTCGAG
GATTCCTGGT GGCGCACGCA CTTCCCGCCG AACGGCTGGG GCTGCAAATG CAGCGTGCAG
CAGCTCGACC AGGAAGATCG CGACGCTTAT CTGGCGCAGG ACGGCTACTC TGAAGACGCG
CCGGACTTCG GCGAGGTCGA CTACGTCAAC CGGCGCACCG GCGAAGTGAC CAAGGTGCCG
CGTGGCATCG ATCCGGGCTG GCAGACAAAT CCCGGTCTTG CGCGGGCGCA GACATTGGTG
ACGCAGCTCA CCGAGACGCT GGCCGAAGCC GGCGGTCTCC GCGCGAAGCC GACCATCGCC
AAGCTGTGGC AAGGCAACTG GCCGAAGGCG ATGGCCAAGC TCGACGAGAC TGTGCAGCTT
CCGGTCGCGG CGTCCCCGCG CGTCGCCGAG GCGCTCGGTG CTGATACCGA GATCGTCACC
GTGGCCAACG AACTGGTTGC GGCCGACATC GCCGCCGGCA AGGTCGCGGA CGCGGGGCGC
TACGCCATCG TGCAGCGGAT CATCGACGCC GGCCGGCTGA TCTCCGGCGC CCGCAACGGG
CTGTCTCGAG TCCGTGCGAT GATCGACGGC AAGAGCTGGA CGCTCACCTT GCGGAAAGGC
GACGATGGCT CGGTCGCCGT CGAAAAACTC ACAAGCCGCT AG
|
|---|
| Protein sequence | MRLTRRQTLA MLAQLAAVKR GFQTPPEILD YFRDKNLKPA FSWLDVWGEE HAHAFTVAGV
TETRVLTEFK EAIDKALTAG TGFEAFKADM QARLTPRGWW GPKVVSDPTG KWKDKTVDFT
KPGRLETTFW SNVRSARAAG QWNRIQRTKE SRPYLVYVRS VAERKRPEHL AWVGTIKPVE
DSWWRTHFPP NGWGCKCSVQ QLDQEDRDAY LAQDGYSEDA PDFGEVDYVN RRTGEVTKVP
RGIDPGWQTN PGLARAQTLV TQLTETLAEA GGLRAKPTIA KLWQGNWPKA MAKLDETVQL
PVAASPRVAE ALGADTEIVT VANELVAADI AAGKVADAGR YAIVQRIIDA GRLISGARNG
LSRVRAMIDG KSWTLTLRKG DDGSVAVEKL TSR
|
|---|
| |