| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0662 |
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| Symbol | |
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| ID | 6408314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 706503 |
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| End bp | 707897 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710576 |
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| Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
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| Protein accession | YP_001989697 |
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| Protein GI | 192289092 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTATCG AAATCAAGAC CCACCGCATC TATCGCGACG GCAAGGCCGT CAATTTCCAG
CAGACCAAAA ACATTGGCGG CCCGATCGTT CCGAAAGTAA TCGTGCTGCA CGATACCGCT
GGTCATCTGC ATGGCCGGGA TTCGATTGTC TGGCTCCGGG GCGGCCCCGG GCAATCGCAG
AATTCCAGCG CTCATGTGGT GATCGGACGC GACGGCACGA TCACTCAGCT CGCAGCGTTC
AACGTGAAGA CGTGGCACGC CGGCATCTCC AACTGGCGAG GTCGCGCCAA TCTCAACGGC
TGGGCGGTTG GTATCGAGAT CGTCAATCCG GGGGGGCCGC TCAGGACCCT TGGTAACGGT
CGCTACCAGG GCATCGACCT GATCGACACG AAGGCCGATC CCTCCCTGAA GGTGCGACCC
GGAGTGTTTC CGCCCTTGAC GCCGGACGGT AAGGCGGTGC CGAGGACTGC GGGGTACTGG
CTGGAGCACT CGCCGGAGCA GATCGACGCC GTGGTCGAGC TGTGCCGCGC GCTGGTGGCG
GCGTATCCGA CCATCACCGA GATCGTCACC CACTGGATGA TCGCGCCGAC CCGCAAGGTC
GACACCAATC CTCTGTTTCC GATCGATGAG GTCCGGCGCC GCGTTTGGCC GGCGCGCTTG
GTCTCGCCCG TGGCGAAGTT CGCCGATCTG GATGACGAAG CCGTCGACGC TATTGCCAGA
TCAGCGCCGG GTGAAATCGA ACAGCATGAA TTTCCGCCGC GTCCCGGTTC GGAGTTGGAG
CCAGACTGGA CTGCCTCGGC CTCCGAAAGC GCAGAGCTAG AGGACGACGG CAACGCCAGT
GAGCACCCGG CCGATCTTCC GGCGCCGACC GAGCCCCATC CGCTTCCGAA GCCGCTGGTC
GAGTTCGTGC AGCAGCGGCT GCGCGCGCTC GGCTACTACG AGGTCGGCAA CATCGACGGC
GACTTCGCCG GTCGCACCGA AGATGCGCTG GTGACCTTCA AGCGCCACAA CGGCCTGCCG
CCGACCACGG ATGTCGACGA CGCGACGTTG CGGGCTTTGG CCGATGCGAG CCCGCGCGAG
ATCGGCGATG CCCGCGCCCG CGCCACGCCG AAGGATGTGA GCAAGATCGT GCCGGCGGTG
CGGCAGGCCG GCCGCTCCAA GCTGCTGGCG TGGCTGCTCG GCGCGCCTTC CGCTGCGGTC
GCTGTGCTGC AGGGCGCCGC CGCCAACGTC TCCAGCGTGA TGAGCGAGCT TTCGCCGATC
ATGGGTTGGC TCCAGGCCGT CCCCGGCTGG GTGTGGGCGC TGCTGATCGT CGGCATCGCT
GCAGGCATCT GGTGGTCCGC ACGCAAGGCC GAGGCCGACA CGGTCGACGC CTACCGCGCC
GGCCGGCTCA CCTGA
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| Protein sequence | MPIEIKTHRI YRDGKAVNFQ QTKNIGGPIV PKVIVLHDTA GHLHGRDSIV WLRGGPGQSQ
NSSAHVVIGR DGTITQLAAF NVKTWHAGIS NWRGRANLNG WAVGIEIVNP GGPLRTLGNG
RYQGIDLIDT KADPSLKVRP GVFPPLTPDG KAVPRTAGYW LEHSPEQIDA VVELCRALVA
AYPTITEIVT HWMIAPTRKV DTNPLFPIDE VRRRVWPARL VSPVAKFADL DDEAVDAIAR
SAPGEIEQHE FPPRPGSELE PDWTASASES AELEDDGNAS EHPADLPAPT EPHPLPKPLV
EFVQQRLRAL GYYEVGNIDG DFAGRTEDAL VTFKRHNGLP PTTDVDDATL RALADASPRE
IGDARARATP KDVSKIVPAV RQAGRSKLLA WLLGAPSAAV AVLQGAAANV SSVMSELSPI
MGWLQAVPGW VWALLIVGIA AGIWWSARKA EADTVDAYRA GRLT
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