| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0634 |
|---|
| Symbol | |
|---|
| ID | 6408285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 687574 |
|---|
| End bp | 687942 |
|---|
| Gene Length | 369 bp |
|---|
| Protein Length | 122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642710547 |
|---|
| Product | protein of unknown function DUF423 |
|---|
| Protein accession | YP_001989669 |
|---|
| Protein GI | 192289064 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2363] Uncharacterized small membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTTT TGCTCCGCCT GCCGATCGTG ATCGCCGGGC TGTATGGCGG TGCCGGCGTC
GCCCTCGCGG CGGCGAGCGC GCATCTGCCG GATGCCAGCC GGCTCGGCCC GGCGTCGTCG
ATGCTGCTGT TTCACGCCTG CGCGATTTCC GCAGCAGTGC TGCTGGTGGA GCGCGGCGTC
GCCCACCGGA TGGCCGGGCT GGCGGCGGTG TTCGGCTTCG TGCTCGGCAC CGCGTTGTTC
GCCGGAGCGC TGACGCTGCG GCAGTTCACA GGCCACGGCC TGTTTCCGAT GGCGGCGCCG
ACCGGTGGCT CGTTGCTGAT CGGCAGCTGG CTGTTGCTCG CAGTCGCCGC ACTGTGGCCA
CGACGCTAG
|
|---|
| Protein sequence | MNFLLRLPIV IAGLYGGAGV ALAAASAHLP DASRLGPASS MLLFHACAIS AAVLLVERGV
AHRMAGLAAV FGFVLGTALF AGALTLRQFT GHGLFPMAAP TGGSLLIGSW LLLAVAALWP
RR
|
|---|
| |