| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0630 |
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| Symbol | dapD |
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| ID | 6408281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 683704 |
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| End bp | 684549 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642710543 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_001989665 |
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| Protein GI | 192289060 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTCA CCGCCCTGGA ATCCACCATC AACGCCGCTT TCGACGCGCG CGACACCGTC
ACCGCGGCGA CGCAGGGCGA GATTCGCCAG GCCGTTGAGG ACGCGCTCGA TCTGCTCGAT
CAGGGCAAGG TGCGGGTCGC GCAGCGTGAT GCCTCCGGCG CTTGGACGGT CAATCAGTGG
CTGAAGAAGG CGGTGCTGCT GTCGTTCCGG CTCAACGACA TGGGCGTGAT CGCCGGCGGG
CCGGGGGGTG CCAACTGGTG GGACAAGGTG CCGTCGAAGT TCGAGGGCTG GGGTGAGAAC
CGCTTCCGCG AAGCCGGCTT CCGCGCGGTG CCGGGCGCGA TCGTGCGCCG CTCTGCCTTT
ATCGCCAAGA ACGCAGTGCT GATGCCGTCG TTCGTCAATC TCGGCGCTTA CGTCGATGAA
AGCACCATGG TCGACACCTG GGCGACCGTT GGCTCCTGCG CCCAGATCGG TAAGCGCGTG
CACATCTCCG GCGGCGCCGG CATCGGCGGG GTACTCGAGC CGCTGCAGGC CGGACCGGTG
ATCATCGAGG ATGACTGCTT CATCGGCGCG CGCTCCGAGG TCGCCGAGGG CGTGATCGTC
CGCAAGGGTG CAGTGCTGGC GATGGGGGTT TTCCTCGGTG CGTCGACCAA GATCGTCGAC
CGCGAGACCG GCGAAGTCTT CGTTGGTGAA GTGCCGGAAT ATGCCGTGCT GGTGCCCGGC
ACCCTGCCCG GCAAGCCGAT GAAGAACGGC GCCCCCGGCC CGGCCACCGC CTGCGCGGTG
ATCGTCAAGC GCGTCGACGA GCGCACCCGT TCCAAGACCT CGATCAACGA ATTGCTGCGA
GACTGA
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| Protein sequence | MPLTALESTI NAAFDARDTV TAATQGEIRQ AVEDALDLLD QGKVRVAQRD ASGAWTVNQW
LKKAVLLSFR LNDMGVIAGG PGGANWWDKV PSKFEGWGEN RFREAGFRAV PGAIVRRSAF
IAKNAVLMPS FVNLGAYVDE STMVDTWATV GSCAQIGKRV HISGGAGIGG VLEPLQAGPV
IIEDDCFIGA RSEVAEGVIV RKGAVLAMGV FLGASTKIVD RETGEVFVGE VPEYAVLVPG
TLPGKPMKNG APGPATACAV IVKRVDERTR SKTSINELLR D
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