Gene Rpal_0621 details

Gene Information

• Locus tag: Rpal_0621
• Symbol: recR
• ID: 6408272
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 675559
• End bp: 676161
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642710534
• Product: recombination protein RecR
• Protein accession: YP_001989656
• Protein GI: 192289051
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.990483
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGGTG CCGCAGGCCC CGAGATCGAA CGTCTGATTC AGTTGCTGGC GCGGCTACCC 
GGATTGGGGC CGCGCTCGGC GCGCCGCGCC GCGCTGCATT TGATCAAGAA GCGCGACGCG 
CTGATGGCGC CGCTCGCCTC CGCCCTGCAG GTTGCGATCG ACAAGATCGA AGTGTGCAGC 
ACCTGCGGCA ACATCGATTC ACAAAACCCG TGCACGGTGT GCACCGATCC GCGACGGGAT 
TCCTCGATCA TCGTGGTGGT GGCCGACGTT GCGGATTTGT GGGCACTCGA ACGCGCCTCT 
GCCACAAACG GCCGGTACCA CGTTCTGGGA GCGACGCTCT CGCCGCTCGA CGGCGTCGGC 
CCCGAAGATC TGACGATCGA CGCGTTGGTG AAGCGTGCAC ATGACCCCGG CGTTGCCGAG 
ATCATCCTGG CGCTCAACGC AACCGTCGAT GGCCAGACCA CCGCACATTA CGTCACCGAC 
CTCTTGCAGG ACGCCAACGT CAAGGTGACC CGGCTCGCTC ACGGCGTGCC GGTCGGTGGC 
GAACTCGACT ATCTCGACGA AGGTACGCTG TCGGCGGCGA TGCGACAGCG CACCTTGTTC 
TGA 

 

Protein sequence

MAGAAGPEIE RLIQLLARLP GLGPRSARRA ALHLIKKRDA LMAPLASALQ VAIDKIEVCS 
TCGNIDSQNP CTVCTDPRRD SSIIVVVADV ADLWALERAS ATNGRYHVLG ATLSPLDGVG 
PEDLTIDALV KRAHDPGVAE IILALNATVD GQTTAHYVTD LLQDANVKVT RLAHGVPVGG 
ELDYLDEGTL SAAMRQRTLF