| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0617 |
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| Symbol | |
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| ID | 6408267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 671420 |
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| End bp | 672352 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710530 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_001989652 |
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| Protein GI | 192289047 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.348665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGC CTTTCCCGCT CGGCCAGCCA GCCTTCGTCA CCCACGTGCT CGACCGCGCT
GCGCATCTGC GCGGCAACGA CGCCAAGCTG ATGGCGATGG AGGAGCGCGG CGACACCCGC
GCCTACGTCG TGCACCGCGA TTCGCTGTTG GTGAAGCACG AGGCCGGCGG CCCGCGGGCC
GAGCTGACGA TCAAGGAGGC GCTGGCGCTC GGCGCCAACC CTGGCACGAT TTTCCTCGGT
CTGCGAAACG GCGCTGCCGT GTTCGGCATG GGGATCGGCG CCCCTGCAGC CGATAAGCTC
GCCGGCCGGA CCGATGCCGG TCTCGCCGAG CTGCGCGGCC TTGCGATGCA GGGCGTGCTG
CCGGTCGAAC AGCTCTCGGC GATCGCGATG GCGAAGTCGC TGGTGAACTG GCATCAGCGC
CACGGCTATT GCGCCAATTG CGGCACCCGC ACCGCGATGG CGCAAGGCGG CTGGAAGCGC
GACTGCCCGT CCTGCAAGGC CGAGCACTTC CCGCGCACCG ATCCGGTGGT GATCATGCTG
GTGACGCGCG GCGACCAATG CCTGCTCGGC CGGCAGAAGC AGTTTCCGGC CGGGATGTAT
TCGTGCCTCG CCGGCTTCGT CGAAGCAGCC GAGACGATCG AGGACGCGGT CCGCCGCGAG
ATCGTCGAGG AGTCCGGCAT TCTGTGCACC GACGTGCGTT ACTACATGAC GCAGCCATGG
CCGTATCCGT CGTCGCTGAT GATCGCCTGC ACGGCGACCG CCACGAGCGA CGACATCACC
GTCGATCTTA CTGAACTTGA AGACGCGCGG TGGTTTTCCC GTGACGAGGC GGCGCAGATG
CTGAAGCGCG AGCATCCGGA CGGACTGCTC GGGCCGCACC CGTTCGCCAT CGCGCACCAT
CTTCTCGGCC GCTGGCTGGA GGGACAATCA TGA
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| Protein sequence | MSTPFPLGQP AFVTHVLDRA AHLRGNDAKL MAMEERGDTR AYVVHRDSLL VKHEAGGPRA
ELTIKEALAL GANPGTIFLG LRNGAAVFGM GIGAPAADKL AGRTDAGLAE LRGLAMQGVL
PVEQLSAIAM AKSLVNWHQR HGYCANCGTR TAMAQGGWKR DCPSCKAEHF PRTDPVVIML
VTRGDQCLLG RQKQFPAGMY SCLAGFVEAA ETIEDAVRRE IVEESGILCT DVRYYMTQPW
PYPSSLMIAC TATATSDDIT VDLTELEDAR WFSRDEAAQM LKREHPDGLL GPHPFAIAHH
LLGRWLEGQS
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