Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0613 |
Symbol | |
ID | 6408263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 668215 |
End bp | 668994 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642710526 |
Product | Methyltransferase type 11 |
Protein accession | YP_001989648 |
Protein GI | 192289043 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.168434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGGTCA TGACCATCGA CGTCGTGGAT CTGCGAGAGT TCTACAGTAG CCGGCTCGGC ATCGTGGCAC GACGGCTGAT CAACCGCGGC ATCCAGTCGC GATGGCCGGA TGCGCGCGGC GATCGCGTGC TCGGCTTCGG CTATCCGACG CCGTATCTCG GCCTGTTCCG CGACAGGTGC GAACGCTGCA TCGCCTTCAT GCCGGCGGCC CAGGGCGTGC TGAAATGGCC AACCGCGCGG TCGACGCTGT CCTCGCTGGT CGACGAACAC GCGTTGCCGC TGCCGGACGC CGCGGTCGAT CGCATCCTGC TGGTGCATGC GTTGGAGATG TCCGACGATC CCGAACGGCT GCTGCGCGAG GTGTGGCGGG TGCTGGCGCC GGCCGGTCGG CTGCTCGCGA TCGTCCCCAA TCGCCGCGGC GTTTGGGCGC GGCTCGACAA CACCCCGTTC GGTCACGGCC GGCCGTATTC GCGCTCGCAG ATCGCCGACC TGCTGCGGCG AACCTGGTTC ACCCCGACGG CCTGGAGCGA GGCGCTGTTC GTGCCTCCTC TGGGGCAAGG CTGGCTGCTG CGCTCGGCGC CGGCCTGGGA GCGGATCGGC GCATCGACCT CCATGCCGTT CGCCGGCGTG CACGTAGTCG AAGCCACCAA ACAGGTGGTC CGGGCGCAGC CGGTCAAGCG CGAACGGATT CGGTTGATTC CGTCGCTGGA GCCGTCGCTG GTGCCGTCAC CAACTCCGAT GCAGGCCGAC GAGCCGGACG CGCCGCCGCT GCTGCGCTGA
|
Protein sequence | MSVMTIDVVD LREFYSSRLG IVARRLINRG IQSRWPDARG DRVLGFGYPT PYLGLFRDRC ERCIAFMPAA QGVLKWPTAR STLSSLVDEH ALPLPDAAVD RILLVHALEM SDDPERLLRE VWRVLAPAGR LLAIVPNRRG VWARLDNTPF GHGRPYSRSQ IADLLRRTWF TPTAWSEALF VPPLGQGWLL RSAPAWERIG ASTSMPFAGV HVVEATKQVV RAQPVKRERI RLIPSLEPSL VPSPTPMQAD EPDAPPLLR
|
| |