Gene Rpal_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0613 
Symbol 
ID6408263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp668215 
End bp668994 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content69% 
IMG OID642710526 
ProductMethyltransferase type 11 
Protein accessionYP_001989648 
Protein GI192289043 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.168434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGTCA TGACCATCGA CGTCGTGGAT CTGCGAGAGT TCTACAGTAG CCGGCTCGGC 
ATCGTGGCAC GACGGCTGAT CAACCGCGGC ATCCAGTCGC GATGGCCGGA TGCGCGCGGC
GATCGCGTGC TCGGCTTCGG CTATCCGACG CCGTATCTCG GCCTGTTCCG CGACAGGTGC
GAACGCTGCA TCGCCTTCAT GCCGGCGGCC CAGGGCGTGC TGAAATGGCC AACCGCGCGG
TCGACGCTGT CCTCGCTGGT CGACGAACAC GCGTTGCCGC TGCCGGACGC CGCGGTCGAT
CGCATCCTGC TGGTGCATGC GTTGGAGATG TCCGACGATC CCGAACGGCT GCTGCGCGAG
GTGTGGCGGG TGCTGGCGCC GGCCGGTCGG CTGCTCGCGA TCGTCCCCAA TCGCCGCGGC
GTTTGGGCGC GGCTCGACAA CACCCCGTTC GGTCACGGCC GGCCGTATTC GCGCTCGCAG
ATCGCCGACC TGCTGCGGCG AACCTGGTTC ACCCCGACGG CCTGGAGCGA GGCGCTGTTC
GTGCCTCCTC TGGGGCAAGG CTGGCTGCTG CGCTCGGCGC CGGCCTGGGA GCGGATCGGC
GCATCGACCT CCATGCCGTT CGCCGGCGTG CACGTAGTCG AAGCCACCAA ACAGGTGGTC
CGGGCGCAGC CGGTCAAGCG CGAACGGATT CGGTTGATTC CGTCGCTGGA GCCGTCGCTG
GTGCCGTCAC CAACTCCGAT GCAGGCCGAC GAGCCGGACG CGCCGCCGCT GCTGCGCTGA
 
Protein sequence
MSVMTIDVVD LREFYSSRLG IVARRLINRG IQSRWPDARG DRVLGFGYPT PYLGLFRDRC 
ERCIAFMPAA QGVLKWPTAR STLSSLVDEH ALPLPDAAVD RILLVHALEM SDDPERLLRE
VWRVLAPAGR LLAIVPNRRG VWARLDNTPF GHGRPYSRSQ IADLLRRTWF TPTAWSEALF
VPPLGQGWLL RSAPAWERIG ASTSMPFAGV HVVEATKQVV RAQPVKRERI RLIPSLEPSL
VPSPTPMQAD EPDAPPLLR