Gene Rpal_0597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0597 
Symbol 
ID6408247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp652863 
End bp653264 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content67% 
IMG OID642710510 
ProductNUDIX hydrolase 
Protein accessionYP_001989632 
Protein GI192289027 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTCC TCCTCGTCGT CGCCGTGGCG CTGATCGATG CCGATAATCG CGTGCTGATT 
GCGCAGCGGC CGAAGCACAA GCAGCTCGGC GGTCTGTGGG AATTTCCCGG CGGCAAGCTC
GATCCCGGGG AGCGGCCGGA GGCGGCGCTG ATCCGCGAGC TCGACGAGGA GCTCGGCATC
ACCGTGAAGG AAGCCTGTCT GGCGCCGCTG ACCTTCGCCA GCCACGCCTA CGAGGACTTT
CACCTGCTGA TGCCGCTGTA TGTCTGCCGG CGGTGGGAAG GCCTGGCGAT GCCGCGCGAA
GGCCAGGAGC TCGCCTGGGT CCGCGCCAAC AAGCTGCGCG ACTACCCGAT GCCGCCGGCG
GACCTGCCGC TGATCCCGCC GCTGATCGAA TTGCTGATGT AA
 
Protein sequence
MNLLLVVAVA LIDADNRVLI AQRPKHKQLG GLWEFPGGKL DPGERPEAAL IRELDEELGI 
TVKEACLAPL TFASHAYEDF HLLMPLYVCR RWEGLAMPRE GQELAWVRAN KLRDYPMPPA
DLPLIPPLIE LLM