| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0594 |
|---|
| Symbol | |
|---|
| ID | 6408244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 648096 |
|---|
| End bp | 650897 |
|---|
| Gene Length | 2802 bp |
|---|
| Protein Length | 933 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642710507 |
|---|
| Product | PII uridylyl-transferase |
|---|
| Protein accession | YP_001989629 |
|---|
| Protein GI | 192289024 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
|---|
| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAG TCGTGTCACC TCCCCGCCCC GCCCCCGACG ATCGCTTCGA CAGCGCCCGC
GTCGCCGCCG AAATCGCAAC GCTGGCCGAA AAACACACCG GCAACGACGC GGCGTTCCGC
ACCGCGCTGG CGATGCTGAT GAAGGCGGAG CTGGCCAAAG CCCGCACCGA GGCCGAAGCG
CAGTTGCTGC GCGACCGCCA CGGCCGGCGC TGCGCCGAGC GGCTGTGCTA CGTCCAGGAC
GCGATCATCC GGCTGCTGTT CAACGCCGCA ACTGAATACC TCTACAACAC CCCGACGCCC
TCGAGCTCGG AACGGATGAC GGTGGTGGCG ACCGGCGGCT ACGGCCGCGG CCTGATGGCG
CCGGAGAGCG ACATCGACCT GCTGTTCATC CTGCCCTACA AGCAGACCGC CTGGGGCGAG
CAGGTCGCCG AAGTCATCCT GTACTGCCTG TGGGACATCG GGCTGAAAGT CGGCCATGCC
ACCCGCTCGG TCGACGAGTG CATCCGCCAG GCGCGCGCCG ACATGACGAT CCGCACCGCG
ATCCTGGAGA CGCGGTTTCT GGCCGGCGAC GAGGCGCTGT ACGCCGAGCT GGTGGAGCGT
TTCGACAAGG AGGTGGTCGA GGGCACCGCG GCCGAATTCG TCGCCGCCAA GCTCGCCGAG
CGCGAGGAGC GCCACCGCCG CTCCGGCCAG TCACGCTATC TGGTCGAGCC CAACGTCAAG
GACGGCAAGG GTGGCCTGCG CGACCTGCAC ACGCTGTTCT GGATCGCCAA ATACGTCTAC
CGGGTTCGCG AAGCCAGCGA GCTGTCCGAG CGCGGCGTGT TCGATCCGGC CGAATTCCGC
ACGTTCCGCC GCTGCGAAGA CTTCCTGTGG TCGGTCCGCT GCAACATTCA CTTCGTGACC
AAGCGCGCCG AAGACCGGCT GTCGTTCGAT CTGCAGCGCG AGATCGGCGT GCGGCTCGGC
TACACCTCGC ATCCGGGAAT GCAGGACGTC GAGCGCTTCA TGAAGCACTA CTTCCTGATC
GCCAAGGAAG TCGGCAACCT CACCGCGATC CTGTGCGCCA AGCTGGAGGA TCAGCAGGCC
AAGGCGGCGC CGGCGCTGAC CCGAATGATG GCGCGGCTGC GGCCCGCCGC CAAGCGCCGC
CGGGTGCCGG AGAGCGACGA TTTCGTCATC GACAATAACC GCATCAATCT GGCAGTGCCG
GACGTGTTCA AGCACGATCC GGTCAATCTG ATCCGGATAT TCCGGCTGGC GCAGAAGAAC
AATCTCGCCT TCCACCCGGA CGCGATGCGC AGCGTGACGC GGTCGCTGTC GCTGATTACG
CCGCAGCTTC GCGACAATCC CGAAGCCAAC CGGCTGTTCG TCGAGATCCT GACTTCCGAC
AACGCCGAGC CGGTGCTGCG GCGGATGAAC GAGACCGGCG TGCTCGGCCG CTTCATCCGC
GCCTTCGGTC GCATCGTGTC GATGATGCAG TTCAACATGT ATCACAGCTA CACGGTGGAC
GAGCATTTGA TCCGCTGCGT CGGCAATCTG CAGGAGATCG AACGCGGCGG GAACGATGAG
TTCGCGCTGT CGTCGGAGCT GATCCGGAAG ATCAGGCCCG ATCACCGTGC GGTGCTGTAT
GCCGCGGTGC TGCTGCACGA TATCGCCAAG GGCCAGCCCG AGGATCACTC CACCGCCGGC
GCCAAGGTGG CGCGGCGGCT GTGCCCGCGC TTCGGCTTCA GCACCGCCGA CACCGAGCTG
GTGGCGTGGC TGATCGAGAA GCATCTGGTG ATGTCCACGG TGGCGCAGTC GCGCGACCTG
TCGGACCGCA AGACCATCGA GAATTTCGCC GCGGTGGTCG AGACCGTCGA GCAGATGAAG
ATGCTCACCA TCCTGACCAC CGCCGACATC CGCGGCGTCG GTCCGGGGGT GTGGAACGGC
TGGAAGGCGC AGTTGATCCG GACCTTGTAC TACGAGACCG AGCCGGTGCT GACCGGCGGC
TTCTCGGAAG TGAACCGCGC CGAGCGCATC CGCGCCGCGC AAGCCGAATT CCGCGCCGCC
TTCACCGAAT GGCCGGAGGC CGACCTCAAT GCCTATGTGG CGCGGCACTA TCCGGCGTAC
TGGCTGAAGG TCGATCTGCA GCGCAAGATC CGCCATGCCC GCTTCCTGCG CGCCTCCGAA
CAGGCCGGCC ATAAGCTGGC GATCAATGTC GGCTTCGACG AAGCCCGCGC CGTCACCGAA
CTCACCATCC TGGCGGTCGA CCATCCGTGG TTGCTGTCGG TGATCGCGGG CGCTTGTGCC
AGCGCCGGCG CCAACATCGT CGACGCCCAG ATCTACACCA CGACCGACGG CCGCGCGCTC
GACACTATCT CGATCAGCCG CGAATACGAC CGCGACGAGG ACGAGGGGCG CCGCGCCACC
CGCATCGGCG AGACCATCGA AGAGGTACTC GAAGGCAAGC TGCGGCTACC CGAGGCGGTC
GCACGCCGCG CGAGCAGCGG CAGCAAGGCC AAGCTGCGCG CCTTCGTGGT CGAGCCCGAG
GTCGAGATCA ACAACAACTG GTCCGACCGC TATACGGTGA TCGAAGTCAG CGGCCTCGAT
CGCCCGGGCC TGCTGTACCA GCTCACCACG GCGATCTCGA AACTCAACCT CAACATCGCC
TCGGCGCATG TCGCGACCTT CGGCGAACGT GCCCGCGACG TGTTCTACGT GACCGATTTG
TTAGGTGCGC AGATCACCGC TCCGACCCGC CAGGCGGCGA TCAAGCGGGC GCTGGTGCAC
CTGCTGGCCA ACGGCGACGC CGCCGAAAAG CCGGCGGCTT GA
|
|---|
| Protein sequence | MDKVVSPPRP APDDRFDSAR VAAEIATLAE KHTGNDAAFR TALAMLMKAE LAKARTEAEA
QLLRDRHGRR CAERLCYVQD AIIRLLFNAA TEYLYNTPTP SSSERMTVVA TGGYGRGLMA
PESDIDLLFI LPYKQTAWGE QVAEVILYCL WDIGLKVGHA TRSVDECIRQ ARADMTIRTA
ILETRFLAGD EALYAELVER FDKEVVEGTA AEFVAAKLAE REERHRRSGQ SRYLVEPNVK
DGKGGLRDLH TLFWIAKYVY RVREASELSE RGVFDPAEFR TFRRCEDFLW SVRCNIHFVT
KRAEDRLSFD LQREIGVRLG YTSHPGMQDV ERFMKHYFLI AKEVGNLTAI LCAKLEDQQA
KAAPALTRMM ARLRPAAKRR RVPESDDFVI DNNRINLAVP DVFKHDPVNL IRIFRLAQKN
NLAFHPDAMR SVTRSLSLIT PQLRDNPEAN RLFVEILTSD NAEPVLRRMN ETGVLGRFIR
AFGRIVSMMQ FNMYHSYTVD EHLIRCVGNL QEIERGGNDE FALSSELIRK IRPDHRAVLY
AAVLLHDIAK GQPEDHSTAG AKVARRLCPR FGFSTADTEL VAWLIEKHLV MSTVAQSRDL
SDRKTIENFA AVVETVEQMK MLTILTTADI RGVGPGVWNG WKAQLIRTLY YETEPVLTGG
FSEVNRAERI RAAQAEFRAA FTEWPEADLN AYVARHYPAY WLKVDLQRKI RHARFLRASE
QAGHKLAINV GFDEARAVTE LTILAVDHPW LLSVIAGACA SAGANIVDAQ IYTTTDGRAL
DTISISREYD RDEDEGRRAT RIGETIEEVL EGKLRLPEAV ARRASSGSKA KLRAFVVEPE
VEINNNWSDR YTVIEVSGLD RPGLLYQLTT AISKLNLNIA SAHVATFGER ARDVFYVTDL
LGAQITAPTR QAAIKRALVH LLANGDAAEK PAA
|
|---|
| |