Gene Rpal_0591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0591 
Symbol 
ID6408241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp643987 
End bp644667 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content67% 
IMG OID642710504 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001989626 
Protein GI192289021 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGC GCGCGGAAAC CCCAGCAAAA ACACGGCGAA GGCCGGTGCA GCCGCGCTCG 
CACGAAACCT CGCGGGCAAT CCGCGACGCT TTTGTTCGGC TTCTCGACGA AAAGCCGTTC 
AGTGAGGTCA CGATCCGCGA GATTGTACTG GTGGCCGGCG TCGGGCTCGG CACCTTCTAC 
GAATATTTCT CCAGCAAGGA CGAGCTGGCA CGCGCCTGTG TGCATCTGCG GACCAAAGAT 
CTGCTGCTGG CGCTGCGCCG CCGCCGCACC GCGCTCGGCA GCTACGATCT CGCCACCGGC 
GTCACGGCGG CGATCACGGC GCAGGCCGAA ATCTATGCCC AGGCGCCGCG GGAATGGATG 
CAGCATTTCA TGCTGGAGCG GCACAAGAGC GAGCGCAGCC ACTATCTCGA AGCCTACGAC 
CTGTTCCTGA AGGAGTGGCA GGCGCTGCTC GAAGGCGCCT CGGACTGGCC CGCCGGCCGC 
TCCGCCGCCG AAGCGGCGTT GCCGGTTTTC AGCCTGATGT ACGGAATGTT CGCCCACGCT 
TTGATCCGGG GCATGCTGCC CGCCGAATTT GCGGTGTACC GCCACCAGCT GGTGCGGGCG 
GCGCTCGGCT GCCTGACGGC AATGGTGCCG CCAGAGGCGA GCGCCGGCGC AATGGAACCC 
GGCGGCCGTC GCCGCGCTTG A
 
Protein sequence
MAKRAETPAK TRRRPVQPRS HETSRAIRDA FVRLLDEKPF SEVTIREIVL VAGVGLGTFY 
EYFSSKDELA RACVHLRTKD LLLALRRRRT ALGSYDLATG VTAAITAQAE IYAQAPREWM 
QHFMLERHKS ERSHYLEAYD LFLKEWQALL EGASDWPAGR SAAEAALPVF SLMYGMFAHA 
LIRGMLPAEF AVYRHQLVRA ALGCLTAMVP PEASAGAMEP GGRRRA