| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0590 |
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| Symbol | |
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| ID | 6408240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 642477 |
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| End bp | 643946 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710503 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001989625 |
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| Protein GI | 192289020 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.806794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGGGA TCTGGACGCG TAAATCTCTG AGCAGCCTGC AAATCGAGGC TGCGGCCGGG
GACAGCGGCG ACGGCGAGGT CCGCCACCTG AAGCGGTCGC TGTCGGCGGT CAATCTGGTC
GCCCTCGGGG TCGGTGGCAT CATCGGTGCC GGCATCTTCG TGCTCACCGG CCACGCCGCC
GCCGCCAATG CCGGGCCGGC GGTGTCGCTG TCGTTCCTGC TCGGCGCGAT CACCTGCGCG
TTCGCCGGGC TGTGCTACGC CGAGATGGCC TCGACCGTGC CGGTTTCTGG CAGCGCCTAC
ACCTATGCGT ATGCGACGAT CGGCGAGCTG GTGGCCTGGA TCATCGGGTG GGACCTGATC
CTGGAATACG CGGTCGGCGC CATCACGGTG GCGATCGGCT GGTCCGGTTA CTTCGTCAGC
CTGCTCGGCA ATTTCGGCAT CCATCTGCTG CCGCAGTTCA CCACGGCGCC GCTCGCTTAC
GACGCCGCAA CCCACGCCTG GTCGACCACC GGGGCGTTTC TCAACCTGCC GGCAATAGCG
ATCGTCGTCG CGATCGCCAC ACTGCTGGTG ATCGGCATCC AGGAATCGGC GCGGTTCAAC
AACGTCATCG TCGGCATCAA GCTGACGGTG ATCGCGCTGT TTCTGATCTT CGCCGCTCCG
ATGGTGACGC CGGCCAACTG GGTGACGGCG GCCAATCCGG ATGGCGCGTT CATTCCACCG
GCGCAGGAGA ACGGCATCTT CGGCTGGTCC GGCGTGCTGC GCGGCGCCGC GGTGGTGTTC
TTCGCCTTCA TCGGGTTCGA CGCGGTCTCG ACCGCCGCCC AGGAAGCCAA GAACCCGCAG
CGCGACATGC CGCTCGGCAT CCTCGGCTCG CTGGCGATCT GCACCGTGCT GTATGTCTCG
GTCGCATTCG TGCTGACCGG GATCGTGCCG TACGACCGGC TCAACGTGCC CGATCCGATC
GCGGTCGGGA TCGACGCCGC CGGGATCGGC TGGCTGTCCT CGATCGTCAA GATCGGCGTC
GTCACCGGGC TGACCTCGGT AATCCTGGTG CTGATGCTCG GGCAGACCCG CGTGCTGCGG
GCGATGGCGC ATGACGGCCT GATGCCGAGG GGCGCCGCCG CCACCCACCC GCGCTTCCGC
ACCCCGCATG TCGCCACCAT CGGCACCGGC GTGATCGTCG CCGGCCTTGC CGGGGTGCTG
CCGATCGGAC TGGTCGGCGA ATTGGTCAGC ATCGGCACGC TGTTCGCGTT CGCGGTGGTC
TGCGTCGGCG TGCTGGCGCT GCGGATCAAG CATCCCGAGC AGCACCGCCC GTTCAAGGTG
CCGGCGATCT GGCTGGTGGC GCCGGCCGGG GCGATCGTAT CGTTCATCCT GATGCTTGGC
CTGCCGCTCG ATACCTGGAT ACGGCTGGCG GTGTGGCTGG CGATCTACTT CCTGTACGGC
CGTCATCACA GCAAGCCCGC GAGGCGCTAA
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| Protein sequence | MAGIWTRKSL SSLQIEAAAG DSGDGEVRHL KRSLSAVNLV ALGVGGIIGA GIFVLTGHAA
AANAGPAVSL SFLLGAITCA FAGLCYAEMA STVPVSGSAY TYAYATIGEL VAWIIGWDLI
LEYAVGAITV AIGWSGYFVS LLGNFGIHLL PQFTTAPLAY DAATHAWSTT GAFLNLPAIA
IVVAIATLLV IGIQESARFN NVIVGIKLTV IALFLIFAAP MVTPANWVTA ANPDGAFIPP
AQENGIFGWS GVLRGAAVVF FAFIGFDAVS TAAQEAKNPQ RDMPLGILGS LAICTVLYVS
VAFVLTGIVP YDRLNVPDPI AVGIDAAGIG WLSSIVKIGV VTGLTSVILV LMLGQTRVLR
AMAHDGLMPR GAAATHPRFR TPHVATIGTG VIVAGLAGVL PIGLVGELVS IGTLFAFAVV
CVGVLALRIK HPEQHRPFKV PAIWLVAPAG AIVSFILMLG LPLDTWIRLA VWLAIYFLYG
RHHSKPARR
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