| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0587 |
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| Symbol | |
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| ID | 6408237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 637978 |
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| End bp | 640311 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642710500 |
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| Product | RNA binding S1 domain protein |
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| Protein accession | YP_001989622 |
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| Protein GI | 192289017 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.173141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGAACA TCGCGTCCGT CATCGCATCC GAACTCGCCG TCCGTGAGCA GCAGGTCCAG
GCCGCAATCG ACCTGCTCGA CGGCGGATCG ACCGTGCCGT TCATCGCCCG CTACCGCAAA
GAGGCGACCG GTATGCTCGA CGACACGCAG CTCCGCACCC TCGAGGAGCG GCTGCGTTAC
CTTCGCGAGA TGGAGGCGCG GCGCACCGCG ATCATCGACA GCATCAAGCA GCAGGGCAAG
ATGACGCCCG AGCTGGAGGC GGCGCTGCTG AAGGCCGACA GCAAGGCGCG GCTCGAAGAC
ATCTATCTGC CGTTCAAGGA GAAGCGGCGC ACCAAGGCGC AGATCGCGCG CGAGGCCGGC
CTGGAGCCGC TCGCCGATCT GTTGTTGCAG AATCCCGACA GGGATCCGCA GGCCGAGGCG
GCGGCCTATG TGAAGGCCGA GGGCGAGCAT CCGGTCGCCG ACGTCAAGGC GGCGCTCGAA
GGCGCCCGTG CCATCCTGGT CGAGCGCTTC TCCGAACACG CCGACCTCAC CGGCTCGTTG
CGTGAAGCAA TGTGGAGCCG CGGCGCGCTG AAGGCCGGGG TGCGCGACGG CAAGAAGACC
GTCGGCGCCA AGTTCGCCGA TTACTTCGAC TTCTCCGAGC CGTACGAGAA GCTTCCTTCG
CACCGCATCT TGGCCCTGCT GCGCGGCGAG AAGGAAGAGG TGCTGTCGCT CGATTTCGGT
GACGGCGAAG ATCCGGAGTC GAAAGAACCG ACCCAGTACG AGAACCGCAT CGCCGCGACC
TTCGGCATCG CCCGCAAGGG CCGTCCCGCC GACGGCTTCC TGTCGGATTG CGTGCGCTGG
GCGTGGCGGA CCCGAATCAA GACCGCGCTG GCGCTCGATA TGCGGATGCG GCTGTGGCAG
CAGGCCGAGA CCGAGGCGGT GCGGGTGTTT GCGGCGAATC TGCGCGACCT GCTGCTCGCC
GCGCCGGCTG GCGGCCGCGC GACGCTCGGC CTCGATCCTG GCTTCCGAAC CGGCGTCAAG
GTCGCGGTGA TCGACCGCAC CGGCAAGATG GTCGACCACG CCACCATCTA TCCGCACGAG
CCGCAGCGGC AATGGAACGA GAGCATGCTG ACGCTGGCGC AGCTGTGCGT GAAGCATCGC
ATCGAGCTGG TGGCGATCGG CAATGGCACC GCCTCGCGCG AGACCGAGAA GCTGGTCACC
GACCTGATGA AGGCCAAGCC GGATCTGAAG TTGACCAAGG CGATCGTGTC GGAAGCCGGC
GCGTCGGTGT ACTCGGCCTC CGAATTCGCC TCCAAGGAAT TCCCCGATCT CGACGTCTCG
ATCCGCGGCG CGGTGTCGAT CGCGCGGCGT CTGCAGGATC CGCTCGGCGA ACTCGTGAAG
GTGCCGCCGC AGTCGATCGG CGTCGGCCAG TATCAGCATG ACCTCAATCA GCACGCGCTG
GCGCGCGCGC TGGACGCCAC GGTGGAAGAC TGCGTGAACG CGGTCGGCGT CGATCTCAAC
ACCGCGTCGG CGCCGCTGCT CGCGCGGGTG TCTGGCATCG GCGAGACGCT GGCGATCAAC
ATCGTGGCGC ACCGCGACGC CAACGGCCCG TTCCCGAGCC GCGACAAGCT GAAGGAAGTG
CCGCGGCTGG GGCCGAAGGC GTTCGAACAG TGCGCCGGGT TCTTGCGGAT CCGCGACGGC
GAAAATCCGC TCGACGCCTC CGGCGTGCAT CCGGAATCCT ATCCAATCGT CAAGAAGATC
CTGGCTGCCA CCAAGAGCGA CATCAAGGCG CTGATCGGCC AGACCAAAAT GCTGCAGGGC
CTCAAGCCGC AGGCCTTCGC GGACGAGAAG TTCGGTATCC CGACCGTCAG CGACATTCTG
AAGGAGCTGG AAAAGCCCGG CCGCGACCCG CGTCCCGAGT TCAAGACCGC GACCTTCCAG
GAGGGCGTCG AGAAGATCAC TGACTTGAAG CCCGGCATGA TCCTGGAAGC GACCATCACC
AACGTGGCGG CGTTCGGCGC TTTCGCCGAT ATCGGCGTGC ATCAGGACGG TCTGATCCAC
ATCTCGGCGA TGTCGGAGCG GCGCATCAAC GATCCGCGCG AAGTGGTGAA GCCGGGCCAG
GTGGTGAAGG TCAAGGTGCT CGAGGTCGAC GTGCCGCGTA ACCGCATCGG CCTGACGCTG
CGAATGTCCG ACCCGATTCC CGCTCCCGGC GAACGCCGCA GCGGCGGTGG TGGCGGCGCC
AGCGCCAAGC TGGTCGACCG CTACAAGCCG CGCCAGGAAG CCCCGAGCGG CGGCGGCGCG
TTCGCCGCGG CGCTGGCGAA GGCGGCCGAG AAGGGACGCA GCAAAGGGCG GTAA
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| Protein sequence | MPNIASVIAS ELAVREQQVQ AAIDLLDGGS TVPFIARYRK EATGMLDDTQ LRTLEERLRY
LREMEARRTA IIDSIKQQGK MTPELEAALL KADSKARLED IYLPFKEKRR TKAQIAREAG
LEPLADLLLQ NPDRDPQAEA AAYVKAEGEH PVADVKAALE GARAILVERF SEHADLTGSL
REAMWSRGAL KAGVRDGKKT VGAKFADYFD FSEPYEKLPS HRILALLRGE KEEVLSLDFG
DGEDPESKEP TQYENRIAAT FGIARKGRPA DGFLSDCVRW AWRTRIKTAL ALDMRMRLWQ
QAETEAVRVF AANLRDLLLA APAGGRATLG LDPGFRTGVK VAVIDRTGKM VDHATIYPHE
PQRQWNESML TLAQLCVKHR IELVAIGNGT ASRETEKLVT DLMKAKPDLK LTKAIVSEAG
ASVYSASEFA SKEFPDLDVS IRGAVSIARR LQDPLGELVK VPPQSIGVGQ YQHDLNQHAL
ARALDATVED CVNAVGVDLN TASAPLLARV SGIGETLAIN IVAHRDANGP FPSRDKLKEV
PRLGPKAFEQ CAGFLRIRDG ENPLDASGVH PESYPIVKKI LAATKSDIKA LIGQTKMLQG
LKPQAFADEK FGIPTVSDIL KELEKPGRDP RPEFKTATFQ EGVEKITDLK PGMILEATIT
NVAAFGAFAD IGVHQDGLIH ISAMSERRIN DPREVVKPGQ VVKVKVLEVD VPRNRIGLTL
RMSDPIPAPG ERRSGGGGGA SAKLVDRYKP RQEAPSGGGA FAAALAKAAE KGRSKGR
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