| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0583 |
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| Symbol | |
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| ID | 6408233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 632706 |
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| End bp | 633926 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642710496 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001989618 |
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| Protein GI | 192289013 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.981919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGCC TGTATCGGGC CGCCGTGGCG GCTCTTGCGA CCGTTGCGCT GTCCGCCGCA
CCCGCCGCGG CGGAGAAGAA ATACGATCCG GGAGCGTCCG ACACAGAGAT CAAGATCGGC
CAAACCGTGC CGTTCTCCGG CCCGGCGTCA GCCTATGCGG GCATCGGCAA GACGCAGGCC
GCCTATATGC GGATGATCAA TGAGCAAGGC GGCATCAACG GACGCAAGAT CAACCTGATC
CAATACGACG ACGCCTATTC GCCGCCCAAG GCCGTCGAGC AGGTTCGCAA GCTGGTCGAG
AGCGACGAGG TGTTGCTGAC CTTCCAGATC ATCGGCACGC CATCCAACGC CGCCGTGCAG
AAATATCTCA ACGCCAAGAA GGTGCCGCAA CTGCTGGCCT CGACCGGCGC GACGCGGTTC
ACCGATCCAA AGAACTTCCC CTGGACGATG GGCTTCAACC CCAACTACCA GACCGAAGGC
CGCATCTACG GCCGCTATAT CCTGCAGCAT CACCCCGACG CCAAGATCGG CATCCTGTTC
CAGAATGACG ACCTCGGCCG CGACTACGTC ACCGGCCTTC GCGCCGCACT CGGCGACAAG
GCCGACAAGA TGATCGTCGC CGAAGCCTCC TACGAACTCA CCGACCCGAC TGTCGACTCG
CAGATCGTCA AGCTGAAGTC CGCCGGCGCC ACGCTGCTGT ACAACGCATC GACACCGCGC
TTCGCCGCGC AGGCGATCAA GAAGGTCGCA GACCTCGGCT GGAATCCGGT CCATATCCTC
GACATCAACG CCAGCCCGGT GTCGGCGACG CTCAAGCCGG CCGGCCTCGA CATCTCCAAA
GGCATCATCA GCGTCAATTA CGGCAAGGAC CCTGCCGACC CACAATGGGC CAACGATGAA
GGCGTGAAGA AGTACTTCGC CTTCATGGAC AAGTACTATC CGGAGGGCGA CAAGCTCAAC
ACCGTCAACA GCTACGGCTA CAGCACCGCA GAGCTGCTGA TCACGATCCT CAAGCAGTGC
GGCGACAACC TGACCCGCGA CAACGTCATG AAGCAGGCCG CCAACCTGAA GAATGTCGTC
GGCGACCTGT CGCTGCCGGG CATGTCGGTC AACACCTCGC CGACCGACTT CCGGGTCAAC
AAGCAGCTCC GGATGATGAA GTTCAACGGC GAGCGCTGGG AACTGTTCGG CCCGATCATC
GAGGACGATG CGGCGATGTA A
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| Protein sequence | MKSLYRAAVA ALATVALSAA PAAAEKKYDP GASDTEIKIG QTVPFSGPAS AYAGIGKTQA
AYMRMINEQG GINGRKINLI QYDDAYSPPK AVEQVRKLVE SDEVLLTFQI IGTPSNAAVQ
KYLNAKKVPQ LLASTGATRF TDPKNFPWTM GFNPNYQTEG RIYGRYILQH HPDAKIGILF
QNDDLGRDYV TGLRAALGDK ADKMIVAEAS YELTDPTVDS QIVKLKSAGA TLLYNASTPR
FAAQAIKKVA DLGWNPVHIL DINASPVSAT LKPAGLDISK GIISVNYGKD PADPQWANDE
GVKKYFAFMD KYYPEGDKLN TVNSYGYSTA ELLITILKQC GDNLTRDNVM KQAANLKNVV
GDLSLPGMSV NTSPTDFRVN KQLRMMKFNG ERWELFGPII EDDAAM
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