Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0576 |
Symbol | |
ID | 6408226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 625002 |
End bp | 625796 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642710489 |
Product | ABC transporter related |
Protein accession | YP_001989611 |
Protein GI | 192289006 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.490377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATCG ATAGCGTTGG CCGGGCGGAT GACCCGGCGG GGTCTTCCTC CGTGTCTGCG GCGATCGAGG TCTCGCATCT GGTCAAGACC TACAAGACCA CGCGGGCGGT CGACGACATC TCGTTCCGTG TCCCGCGCGG CAGCATCACC GGACTGCTCG GCGGCAACGG CGCCGGCAAG ACCACGACGA TCGCGATGAT CATGGGGCTG GTGCTGCCGA CCGCAGGGCG GATCCGCGTA CTCGGCTGCG CGATGCCCGA GCAGCGCGCC GATGTGCTCG GCCGGATCAA TTTCGAAAGT CCTTATGTCG ACATGCCGTC GCGGCTGACG GTGCGGCAAA ACCTGACGGT GTTCGGCCAG CTCTACGCGG TGCCGGACTT GCGCGGCCGG ATTGCCGAAC TCGCCGCCGA TTTCGATCTG ACCGACTTTC TCGACCGCGC CTCCGGCAAA TTGTCGGCCG GGCAGAAGAC CCGGGTGGCG CTGGCAAAGG CGCTGATCAA CCAGCCCGAA TTGTTGCTGC TCGACGAGCC GACCGCTTCG CTCGATCCCG ACACCGCCGA CTGGATCAGG TCGCATCTGG AAAGTTATCG CAAGCGCCGC GGCGCCAGCA TCCTGCTGGC TTCGCACAAC ATGCTCGAGG TCGAGCGGCT GTGCGATCGC GTCGTGATCA TGAAGCGCGG CCGGATCGAG GACGACGACA CCCCGTCGGC GATCATGGCG CGCTATCACC GGTCGACGCT GGAGGAGGTG TTTCTCGACG TCGCCCGCGG CCGGGCACGG GATGCAGAAT CATGA
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Protein sequence | MAIDSVGRAD DPAGSSSVSA AIEVSHLVKT YKTTRAVDDI SFRVPRGSIT GLLGGNGAGK TTTIAMIMGL VLPTAGRIRV LGCAMPEQRA DVLGRINFES PYVDMPSRLT VRQNLTVFGQ LYAVPDLRGR IAELAADFDL TDFLDRASGK LSAGQKTRVA LAKALINQPE LLLLDEPTAS LDPDTADWIR SHLESYRKRR GASILLASHN MLEVERLCDR VVIMKRGRIE DDDTPSAIMA RYHRSTLEEV FLDVARGRAR DAES
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