Gene Rpal_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0571 
Symbol 
ID6408221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp620277 
End bp620942 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content66% 
IMG OID642710484 
Productbeta-lactamase domain protein 
Protein accessionYP_001989606 
Protein GI192289001 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.695514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGA CCCAGACCAA GGCCAAAGCC GGCGCCGCGA TCATTCCCGT GACGCCGTTT 
CAGCAGAACT GCACGCTGTT GTGGTGCGAA GCCACCCGCA AGGCTGTGGT GGTCGATCCC 
GGCGGCGACG TGCCCGAGAT CCTGGCCGCG ATCGAAAAAA CCAAAGTCGA CGTCGGGGCG 
ATCTGGCTCA CCCATGGCCA CATCGACCAT GTCGGCGGCG CGGCCGATCT GCGCGACGCG 
CTTAAGGTCG AGGTGATCGG CCCGCATCGC GACGACCAGT TCCTGCTCGA CAACGTCGTC 
AACTCCGGCC GCAGCTTCGG GATCGACGGC GTCCGCGACG TCACCCCGGA CCGCTGGCTC 
GACGACGGTG ACAGCGTCAG CATCGGCGAG CTGAATTTTC AGATCCTGCA CTGCCCCGGC 
CATTCGCCGG GCAGCGTCGT GTTCTTCAAC GATGCGATGC GGTTCGCCTT CGTCGGCGAC 
GTGCTGTTTG CCGGCTCGGT CGGCCGTACC GATCTGCCGG GCGGCAGCCA CGCCACCCTG 
ATTCAGTCGA TCACCCAGAA GCTGCTGCCG CTCGGCGACG ACGTCGGCTT CATCTGCGGT 
CACGGCCCCG GCTCCAGCTT CGGTCAGGAG CGCCTGACCA ACCCGTTCCT GACCGGCGAA 
GCCTGA
 
Protein sequence
MSETQTKAKA GAAIIPVTPF QQNCTLLWCE ATRKAVVVDP GGDVPEILAA IEKTKVDVGA 
IWLTHGHIDH VGGAADLRDA LKVEVIGPHR DDQFLLDNVV NSGRSFGIDG VRDVTPDRWL 
DDGDSVSIGE LNFQILHCPG HSPGSVVFFN DAMRFAFVGD VLFAGSVGRT DLPGGSHATL 
IQSITQKLLP LGDDVGFICG HGPGSSFGQE RLTNPFLTGE A