| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0570 |
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| Symbol | |
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| ID | 6408220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 619039 |
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| End bp | 620016 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642710483 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001989605 |
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| Protein GI | 192289000 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTCG AGCTTCTCAA CGAACCACTC TCCAGGTACC CCGCGTTCGA CACCGCCGAT
CCGGAAGAAC TGCGACAGGC CTTGAGCTCC GTTTACGGCG CCAAGCTGGT GGAAGGTCCC
ATCGCCGCTG ATTTCCATGC GCGCAGCAAT TTCGTCCAGC TCGATGACAT CGCGCTCGCC
TTCGGTGTCG GCACGGGATC AATCGCGGTC GAATTCCCCG AGGGGGAATG TGCGCGGCTG
CAGATCGCGC TCTCCGGGCA GTTCACCACC CGCAGCGGCG GCACCAGCAC GGCGATCAAC
GCACGGCAGG CCGGCATCAT CTCGCCGGGC CGCAATGCCC GCACCGAGTA TGGGCAGAAC
TACAGCTTCA CCCTGCTGCG CATAAGCACC TCGGCGCTGG AGCGGAAGCT GACCACTCTG
CTCGGCTGCA AGCCGAAGGC TTCGCTCGAA TTCGAGCCGG CGGCCAACAA CGAAGCTCCG
CAGGTGGTCA ACTTGCGCCG GATGCTGTGC TTCCTGGCCA ATCAGCTGAA TTGCAGCCCG
CTGCCGCCGG TGGTTCTGGC CGAGCTGCAG GAAGCGATCA CCCTGCTGTT CCTCAGCGCC
TTCCGGCACA ATTACAGCCG GCAGCTCGAA CGGGAGTCGC ACGGGATCGC GCCGAAGCAC
GTCCGCCAGG TCGAGGAATA TATCGAAGCC AACTGGATGC GGCCGATCAC CATCGAGAAG
CTGACGGCTC TGACCGGGAT CAGTTCACGC GGCATCTTCA AGGCGTTCCA GCGCAGCCGT
GGCTACTCGC CGATGGCCTT CGCCAAGCGG GTGCGGCTGC AGCACGCCCA TAACCTGCTG
TCGGACGGCG CGACGCCCAC CACGGTCACG GCTGCAGCGC TGTCCTGCGG CTTTTCCAAT
CTCGGGCATT TCGCCCGCGA CTATCGCGAC ATGTTCGGTG AAAAACCCTC GGAAACGCTG
CAACGCGCGC GACCCTAA
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| Protein sequence | MTVELLNEPL SRYPAFDTAD PEELRQALSS VYGAKLVEGP IAADFHARSN FVQLDDIALA
FGVGTGSIAV EFPEGECARL QIALSGQFTT RSGGTSTAIN ARQAGIISPG RNARTEYGQN
YSFTLLRIST SALERKLTTL LGCKPKASLE FEPAANNEAP QVVNLRRMLC FLANQLNCSP
LPPVVLAELQ EAITLLFLSA FRHNYSRQLE RESHGIAPKH VRQVEEYIEA NWMRPITIEK
LTALTGISSR GIFKAFQRSR GYSPMAFAKR VRLQHAHNLL SDGATPTTVT AAALSCGFSN
LGHFARDYRD MFGEKPSETL QRARP
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