| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0568 |
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| Symbol | |
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| ID | 6408218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 617228 |
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| End bp | 618415 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710481 |
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| Product | esterase, PHB depolymerase family |
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| Protein accession | YP_001989603 |
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| Protein GI | 192288998 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCACTTA AGAATCCTAT CGACTTCCTC GGGCAGCTCC GAAAAATGCA AAGCATCAAT
GGTTTGGGTT GGGGGGAGGT GCCTACCGAC AACCGCCTGA TCGAGACCGT CTCGTTCGGT
ACCAATCCGG GCGATCTCCG GATGTTCTCG TTCGTCCCCA AAGGGGCGAC GCAGCGGCTG
CCGCTGGTGG TCGTTCTGCA CGGCTGCACC CAGAATGCCG CCGCCTACGA AATCGGCGCC
GGCTGGTGCA CGCTGGCGCA GCGCTATGGG TTTGCGTTGC TGTTGCCGGA ACAGACTCGC
ACCAACAATC CCAACACCTG CTTCAACTGG TTCAGCCCGG ACGACATCCG TCGCGGCAGC
GGTGAAGTCG GCTCGATCCA CCAGATGATC GAGCATATGA CGCGCACGCA TCAGATCGAT
CAGGCGCGGA TCTTCGCCAC CGGCCTGTCT GCGGGCGGCG GGATGACCGC AGCGCTGCTG
GCGACCTATC CGGACGTGTT TGCCGGTGGT GCGGTGATCG CCGGCCTGCC CTATGGCGTC
GCCCACAATG TCCGGCAGGC GCTGAAGGAA ATGCGCCATG CCACGCCGCG CTCAGGTCCT
GAGCTCGGCG AGCTGGTGCG TCACGCCACC GCGCATCAGG GACCGTGGCC GAAGCTCGCC
GTCTGGCACG GCGACGCCGA TCACACCGTC GACCCGGCGA ATGCGGATGC GCTGGTGCGG
CAGTGGCTCG ACCTGCACGG CCTCGCCGAA GCGCCGACCG CGCAGAACGA GGTCTGCGGC
TATCCCCATC GCGCGTGGCG CAATTCGAGC GGTGAAACCG TGGTCGAATC CTACACCGTC
ACCGGGATGG CACACGGCAC GCCGCTCGGC GCCGGCGCGG GCGACGAGCG CTACGGCGTC
GCCGGCGCGT ATCTGCTCGA TGTCGGAATT TCGTCGTCCT ATCACATCGC TCAGTTCTTT
GGGCTGACGA GCCGGATTCA CCAGCCGCGG TCCGCGGACA CGTCGGCCAA AGATCGGCCG
GCCCATGATG GGCATCACGA ACTGACCACG GACGTAGCAC GCAGGAGCCG CAAATCAGCC
GGAACCGGCC ATGCCGAGGG GGCAGCGGCG CCGCCGCACG GCAAGCGCGG GATCGATGTC
GGTGCGGTGA TCACGCGTGC GCTGACCGCT GCCGGATTGA TGAAGTAG
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| Protein sequence | MSLKNPIDFL GQLRKMQSIN GLGWGEVPTD NRLIETVSFG TNPGDLRMFS FVPKGATQRL
PLVVVLHGCT QNAAAYEIGA GWCTLAQRYG FALLLPEQTR TNNPNTCFNW FSPDDIRRGS
GEVGSIHQMI EHMTRTHQID QARIFATGLS AGGGMTAALL ATYPDVFAGG AVIAGLPYGV
AHNVRQALKE MRHATPRSGP ELGELVRHAT AHQGPWPKLA VWHGDADHTV DPANADALVR
QWLDLHGLAE APTAQNEVCG YPHRAWRNSS GETVVESYTV TGMAHGTPLG AGAGDERYGV
AGAYLLDVGI SSSYHIAQFF GLTSRIHQPR SADTSAKDRP AHDGHHELTT DVARRSRKSA
GTGHAEGAAA PPHGKRGIDV GAVITRALTA AGLMK
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