Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0558 |
Symbol | |
ID | 6408208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 607089 |
End bp | 607646 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642710471 |
Product | HNH endonuclease |
Protein accession | YP_001989593 |
Protein GI | 192288988 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACGCGC ATGTCTCACA TGGCGGTTGG CCGGTGCTGG TGCTCAACGC GGACTTCCGG CCGCTCAGCT ACTATCCGTT GTCGCTTTGG TCGTGGCAGG ACGCGGTCAA AGCGGTGTTC CTTGATCGCG TCAATATCGT CGCCCATTAC GACCGTGCGG TGCACAGCCC GAACCTCGAA TTCCGGCTTC CCAGCGTCGT ATCTCTGAAA TCCTTCGTCA AACCGACCAC GAATCCGGCC TTCACGCGGT TCAACGTGTT CCTGCGCGAT CGGTTCGTTT GCCAGTATTG CGGCGCGCCC GACGATCTCA CCTTCGATCA CATCATCCCG CGCTCCAAGG GCGGCCAGAC CACCTGGGAG AACGTCGTCG CGGCCTGCTC GCCGTGCAAC TTGCGCAAGG GCAATCTGAC GCCCGAGCAA GCCAAGATGT TCCCCCGCCA GACCGCGTTC GCCCCGACAG TCCATCAGCT CCACCGCAAC GGCCGGCTGT TCCCGCCGAA CTATCTGCAC GAGAGCTGGC TCGATTACTT ATATTGGGAC ACTGAGCTGG ACCCGTAG
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Protein sequence | MNAHVSHGGW PVLVLNADFR PLSYYPLSLW SWQDAVKAVF LDRVNIVAHY DRAVHSPNLE FRLPSVVSLK SFVKPTTNPA FTRFNVFLRD RFVCQYCGAP DDLTFDHIIP RSKGGQTTWE NVVAACSPCN LRKGNLTPEQ AKMFPRQTAF APTVHQLHRN GRLFPPNYLH ESWLDYLYWD TELDP
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