Gene Rpal_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0558 
Symbol 
ID6408208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp607089 
End bp607646 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content61% 
IMG OID642710471 
ProductHNH endonuclease 
Protein accessionYP_001989593 
Protein GI192288988 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACGCGC ATGTCTCACA TGGCGGTTGG CCGGTGCTGG TGCTCAACGC GGACTTCCGG 
CCGCTCAGCT ACTATCCGTT GTCGCTTTGG TCGTGGCAGG ACGCGGTCAA AGCGGTGTTC
CTTGATCGCG TCAATATCGT CGCCCATTAC GACCGTGCGG TGCACAGCCC GAACCTCGAA
TTCCGGCTTC CCAGCGTCGT ATCTCTGAAA TCCTTCGTCA AACCGACCAC GAATCCGGCC
TTCACGCGGT TCAACGTGTT CCTGCGCGAT CGGTTCGTTT GCCAGTATTG CGGCGCGCCC
GACGATCTCA CCTTCGATCA CATCATCCCG CGCTCCAAGG GCGGCCAGAC CACCTGGGAG
AACGTCGTCG CGGCCTGCTC GCCGTGCAAC TTGCGCAAGG GCAATCTGAC GCCCGAGCAA
GCCAAGATGT TCCCCCGCCA GACCGCGTTC GCCCCGACAG TCCATCAGCT CCACCGCAAC
GGCCGGCTGT TCCCGCCGAA CTATCTGCAC GAGAGCTGGC TCGATTACTT ATATTGGGAC
ACTGAGCTGG ACCCGTAG
 
Protein sequence
MNAHVSHGGW PVLVLNADFR PLSYYPLSLW SWQDAVKAVF LDRVNIVAHY DRAVHSPNLE 
FRLPSVVSLK SFVKPTTNPA FTRFNVFLRD RFVCQYCGAP DDLTFDHIIP RSKGGQTTWE
NVVAACSPCN LRKGNLTPEQ AKMFPRQTAF APTVHQLHRN GRLFPPNYLH ESWLDYLYWD
TELDP