| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0539 |
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| Symbol | |
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| ID | 6408188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 590049 |
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| End bp | 591503 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642710451 |
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| Product | porin |
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| Protein accession | YP_001989574 |
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| Protein GI | 192288969 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCA TTAAGCAACT GGCGCTGGGA ACAGCTGCGG CGGTGATCGC CGTCGGCAGC
GCTCAGGCCG CTGATCTTCC GTTGAAGGCG AAAGCCGTCG AATACGTGAA GGTCTGCTCG
ATCTACGGCG CCGGCTTCTA CTACATCCCG GGCACCGACA CCTGCATCAA GCTCGGCGGC
TATCTGCGCG CCGACGTCAC GATGTTCGGC AGCGGCGGCT ATAACGCTCC GGCCTGGAAC
GGCAACGCGG GTCAGAAGAA CCGTCTTTCC AACGACTACA TCTTCCGGTC TCGTCAGGAC
ATCAACATCG ACACCCGCAC CGCGACCGAA TACGGCGTGG TTCGTACCTA CTTTGACGCG
ACGTTCAACT GGACCACCGG CTCTGACACC ATCGCCAACG GTTCGCTCGG CGTGTACTAC
GCGTTCATCC AGTTCGCCGG CTTCACCTTC GGTAAGGCGG TGTCGCAGTT CGACACTCCC
TGGACCGGCT ATCCGGGCAA CAACACCTCG TTCCTGATCG GCGGTTACGA CGACGTCACC
GGCATCAACC AGGTGTCGTA CACCGCAGAG TTTGGCAACG GCGTGTCGGC GTCGATCTCG
CTCGAGGATC AGTCGTCGTA CCTGCAGTCG GCGCTGTACA ACGTTTCGTC CGCCCCGAAC
TTCCTGGCCT ACGGCGCCAA CTCCTATGCC GGCACCTCGA TCCCCGACAT CGTCGGCAAG
ATCCGCGTCG ACCAGGCTTG GGGTCTGTTC CAGGTTTCGG CCGCGGCGCA TCAGGTTCGC
GCCAGCTACT ACAACCCGGC ACTCGAGACC TCCGGCCATC CGAGCGACAC CTGGGGCTAC
GCGGTTCAGG GCGCTCTGTC GCTCAAGAAC CTGCCGACCG GCCCCGGCGA CAGCATCAAC
ATCACGGCGA CCTACTCGAA CGGCGCGACC CGTTACGTGC TGGGCGGCGT GAGCCCGAAC
TCGTTCGCGA TCTACGGCAA CAACTCGGTT CCGGGCACCT ACCAGAGCGT CGCGTTCGGC
GTTGCGGCTG ACGGCGTTTT CGCTGGCCTC AACAACCTGA CCGGCTCCGG CATCGAGAAG
ACCAGCGCCT GGGGCGTCCG TGGTGCGTTC AACCACAACT GGAACCCCTA CTGGTCGACC
TCGCTGTTCG GTTCGTACAC CAAGATCGAC TACAACGGCA CCGCGACTGC TCTGATCTGC
AACGGTCTCG GCGCTGGGAA CGTCGCCGGC TTCAACTGCA ATCCGGACTT CGCGATTGCT
CAGGTGGGCA CCGTCACCCG TTGGACCCCG GTCAAGAACC TGACCCTGTC GGGCGAAGTG
ATGTACACCT ACCTCGATCA GGCTTCCTCG GGTGTGCTGC CGCTAACCGC TTCGGCGACC
AAGCCGGCCG CGAACTACGA GTTCAAGGAC CAGGGCGTCT GGAGCGGCAA CCTCCGCGTT
CAGCGCAACT TCTGA
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| Protein sequence | MNIIKQLALG TAAAVIAVGS AQAADLPLKA KAVEYVKVCS IYGAGFYYIP GTDTCIKLGG
YLRADVTMFG SGGYNAPAWN GNAGQKNRLS NDYIFRSRQD INIDTRTATE YGVVRTYFDA
TFNWTTGSDT IANGSLGVYY AFIQFAGFTF GKAVSQFDTP WTGYPGNNTS FLIGGYDDVT
GINQVSYTAE FGNGVSASIS LEDQSSYLQS ALYNVSSAPN FLAYGANSYA GTSIPDIVGK
IRVDQAWGLF QVSAAAHQVR ASYYNPALET SGHPSDTWGY AVQGALSLKN LPTGPGDSIN
ITATYSNGAT RYVLGGVSPN SFAIYGNNSV PGTYQSVAFG VAADGVFAGL NNLTGSGIEK
TSAWGVRGAF NHNWNPYWST SLFGSYTKID YNGTATALIC NGLGAGNVAG FNCNPDFAIA
QVGTVTRWTP VKNLTLSGEV MYTYLDQASS GVLPLTASAT KPAANYEFKD QGVWSGNLRV
QRNF
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