| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0538 |
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| Symbol | |
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| ID | 6408187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 587743 |
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| End bp | 589302 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642710450 |
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| Product | succinate CoA transferase |
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| Protein accession | YP_001989573 |
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| Protein GI | 192288968 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0427] Acetyl-CoA hydrolase |
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| TIGRFAM ID | [TIGR03458] succinate CoA transferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAACG CCGAGCGCAT CCTTGCTCCT CACCTCCGCT CCAAGGTCAT GACCGCAGCT
GACGCTGCCG CGCTGATTCC GTCCGGCGCG CATGTCGGCA TGAGCGGCTT CACCGGCGCG
GGTTATCCGA AGCTGCTGCC GCTGGCGCTC GCCGAGCGCA TCAACGCGCA TCACGCCCGC
GGCCAGAAGT TCAAGGTCAG CGTCTGGACC GGCGCCTCGA CGGCGCCCGA GCTCGACGGT
GCACTCGCCA AGGTCGACGG CATCGAGATG CGGCTGCCCT ATCAATCCGA TCCGACCTGC
CGCAAGCGCA TCAACGCCGG GCGGATGGAA TACATCGACA TCCATCTGTC CCACGTCGCC
CAGCACGCCT GGTTCGGCTT CCTCGGTAAG CTCGACATTG CTGTGGTCGA AGTCGCCGGC
ATCCGCGAGG ACGGCAGCCT GATCCCGTCG TCGTCGATCG GCAACAACAA GACTTGGCTC
GATCTCGCCG ACAAGGTCAT CCTCGAGGTC AACGCCTGGC AGGACATTCG CCTCGAAGGC
ATGCATGACG TCTATTACGG CACGCAGCTG CCGCCGAACC GCAAACCGAT TCCGATCATC
GCCTCCGGTG ACCGCATCGG GGAGCAGTAT CTGCGCTGCG ATTCCGCCAA GATCGTCGCG
ATCGTCGAGA CCAACCTGCC CGATCGCAAC TCGGCGTTCT CGCCGCCCGA CGACACCTCG
CAGGCGATCG CCGGCCACAT CCTGGATTTC CTCGGCCACG AGGTGAAGAA GGGCCGGCTG
CCGCACAACC TGTTGCCGCT GCAATCGGGC GTCGGCAACG TCGCCAATGC GGTGATGGCC
GGCCTCGAAG ATGGCCCGTT CGACAATCTC ACCGCCTATA CCGAAGTGCT GCAGGACGGC
ATGCTGCACC TGTTGCGCAA GGGAAAGCTG GCTCACGCCT CGGCGACCGC GTTGTCGCTG
TCACCGGAAG GCTACGATGA ATTCCTGCGC AATCTCGACT TCTATCGCGA GCGCATCGTG
CTGCGTCAGC AGGAGATTTC CAACCATCCG GAAGTGATCC GCCGGCTCGG CGTGATCGCC
ATGAACGGCA TGATCGAGGC CGACATCTAC GGCAACGTCA ACTCGACCCA CGTGATGGGC
ACCAGCATCA TGAACGGCAT CGGCGGCTCC GGCGACTTCG CCCGCAACAG CTTCCTGTCG
TTCTTCATGA CGCCGTCGGC CGCCAAGGGC GGCAAGATCT CCTGCATCGT GCCGATGACC
TCGCATGTCG ACCACACCGA GCACGACGTT CAGGTGATCG TCACCGAGCA GGGGCTCGCC
GATCTGCGCG GCCTGTCGCC GAAGCAGCGC GCCAAGGTGA TCATCGAGAA CTGCGCGCAC
CCGACCTTCC GGCCGGCCTT GAAGGAATAC TTCAAGCGCG CGCTGGAATA TTCGCCGGGC
CTGCACACCC CGCACATTCT CGACGAAGCG CTGACCTTCC TGCCAAACTG GATGGCCAAC
AAGGCCGCGC GCGAAGCCTG GCGCGACGAC GCCGTGGTGC AGGCCGACGC CTGGCGGTAG
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| Protein sequence | MVNAERILAP HLRSKVMTAA DAAALIPSGA HVGMSGFTGA GYPKLLPLAL AERINAHHAR
GQKFKVSVWT GASTAPELDG ALAKVDGIEM RLPYQSDPTC RKRINAGRME YIDIHLSHVA
QHAWFGFLGK LDIAVVEVAG IREDGSLIPS SSIGNNKTWL DLADKVILEV NAWQDIRLEG
MHDVYYGTQL PPNRKPIPII ASGDRIGEQY LRCDSAKIVA IVETNLPDRN SAFSPPDDTS
QAIAGHILDF LGHEVKKGRL PHNLLPLQSG VGNVANAVMA GLEDGPFDNL TAYTEVLQDG
MLHLLRKGKL AHASATALSL SPEGYDEFLR NLDFYRERIV LRQQEISNHP EVIRRLGVIA
MNGMIEADIY GNVNSTHVMG TSIMNGIGGS GDFARNSFLS FFMTPSAAKG GKISCIVPMT
SHVDHTEHDV QVIVTEQGLA DLRGLSPKQR AKVIIENCAH PTFRPALKEY FKRALEYSPG
LHTPHILDEA LTFLPNWMAN KAAREAWRDD AVVQADAWR
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