| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0535 |
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| Symbol | |
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| ID | 6408184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 583269 |
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| End bp | 583790 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710447 |
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| Product | conserved hypothetical protein; putative signal peptide; putative protease |
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| Protein accession | YP_001989570 |
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| Protein GI | 192288965 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3577] Predicted aspartyl protease |
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| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGCA TCATGATTTT CGCCGCAGCC CTCGTGGTGC TCGGCACCGC GATGGCCCAA
ATCGCCGACC GGATTACCCC GGCTCCGGCG CAGGCCCATG CCGCCCCTCA CGGCACCATC
GGCACGGCGG CAGCGACTCC CGAAACCTAT GGCCGCAGCA TCAGCATCGA CCGCGACCCG
CGCGGCCACT TCCGCACCGA TGGCCGGATC GACGGCCAGC GACTGTCGTT CATGGTCGAC
ACCGGCGCCT CGGTGGTCGC TCTCAACGAA AGCTCGGCGG CGCGGTTCGG TTTGCGGCCG
TCGCGCGGCG ACTACACCGC CAAGGTCTCG ACCGCGAACG GCCAGGTGAA AGCCGCGCGC
GCGCGCATCG CGATGCTGGA CGTCGGCGGC CTGATCGTGC GCGACGTCGA TGCGCTGGTA
CTTCCCGACG AAGCGCTGTC GGAGAACCTG CTCGGCCTGT CGTATCTGTC GAAGCTGAAG
CGCTTCGCCT ATGCCGACGG CCGGATGGTT CTCGAGCAGT AA
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| Protein sequence | MRSIMIFAAA LVVLGTAMAQ IADRITPAPA QAHAAPHGTI GTAAATPETY GRSISIDRDP
RGHFRTDGRI DGQRLSFMVD TGASVVALNE SSAARFGLRP SRGDYTAKVS TANGQVKAAR
ARIAMLDVGG LIVRDVDALV LPDEALSENL LGLSYLSKLK RFAYADGRMV LEQ
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