Gene Rpal_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0533 
Symbol 
ID6408182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp581581 
End bp582306 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content61% 
IMG OID642710445 
Productacetoacetyl-CoA reductase 
Protein accessionYP_001989568 
Protein GI192288963 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGGG TGGCGTTGGT GACTGGGGGG ACGCGCGGTA TCGGTGCAGC AATCAGCAAG 
GCGTTGAAAG CGGCGGGCTA CAAAGTCGCA GCGTCTTATG CGGGCAACGA TTCGGCAGCG
GAGAAATTCA AAAACGAGAC GGGTATTCCG GTATATAAAT GGGACGTGAG TTCGTTCGAT
GCCTGTGCCG AGGGCGTCAA GAAAGTCGAG GCCGAACTCG GTCCCGTCGA TGTTCTGGTC
AACAATGCCG GCATCACGCG CGACGGCGCC TTCCACAAGA TGACGCTCGA GCAATGGAAT
GCGGTGATCA ACACCAATCT CGGCTCGCTG TTCAACATGA CCCGGCAGGT GATCGAAGGC
ATGCGCACGC GCAAGTTCGG GCGCATCGTC AACATCTCGT CGATCAACGG TCAGAAGGGG
CAGTTCGGTC AGGTGAACTA TTCGGCCGCG AAGGCGGGCG ACATCGGCTT CACCAAAGCG
CTGGCGCTGG AGAATGCGCG CGGCGGCATC ACCGTCAATG TGATCTGCCC GGGCTACATC
AACACCGAAA TGGTGCAGGC CGTGCCGAAG GACGTGCTCG ACAAGGCGAT CCTGCCGCTG
ATTCCGTGCA ACCGGCTCGG CGAAGCCGAG GAGATCGCGC GCGCCGTGGT GTTCCTCGCC
GGCGACGATG CGGGCTACAT CACCGGTTCG ACGCTCACCA TCAACGGCGG CCAATACATG
GTTTGA
 
Protein sequence
MTRVALVTGG TRGIGAAISK ALKAAGYKVA ASYAGNDSAA EKFKNETGIP VYKWDVSSFD 
ACAEGVKKVE AELGPVDVLV NNAGITRDGA FHKMTLEQWN AVINTNLGSL FNMTRQVIEG
MRTRKFGRIV NISSINGQKG QFGQVNYSAA KAGDIGFTKA LALENARGGI TVNVICPGYI
NTEMVQAVPK DVLDKAILPL IPCNRLGEAE EIARAVVFLA GDDAGYITGS TLTINGGQYM
V