Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0533 |
Symbol | |
ID | 6408182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 581581 |
End bp | 582306 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642710445 |
Product | acetoacetyl-CoA reductase |
Protein accession | YP_001989568 |
Protein GI | 192288963 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCGGG TGGCGTTGGT GACTGGGGGG ACGCGCGGTA TCGGTGCAGC AATCAGCAAG GCGTTGAAAG CGGCGGGCTA CAAAGTCGCA GCGTCTTATG CGGGCAACGA TTCGGCAGCG GAGAAATTCA AAAACGAGAC GGGTATTCCG GTATATAAAT GGGACGTGAG TTCGTTCGAT GCCTGTGCCG AGGGCGTCAA GAAAGTCGAG GCCGAACTCG GTCCCGTCGA TGTTCTGGTC AACAATGCCG GCATCACGCG CGACGGCGCC TTCCACAAGA TGACGCTCGA GCAATGGAAT GCGGTGATCA ACACCAATCT CGGCTCGCTG TTCAACATGA CCCGGCAGGT GATCGAAGGC ATGCGCACGC GCAAGTTCGG GCGCATCGTC AACATCTCGT CGATCAACGG TCAGAAGGGG CAGTTCGGTC AGGTGAACTA TTCGGCCGCG AAGGCGGGCG ACATCGGCTT CACCAAAGCG CTGGCGCTGG AGAATGCGCG CGGCGGCATC ACCGTCAATG TGATCTGCCC GGGCTACATC AACACCGAAA TGGTGCAGGC CGTGCCGAAG GACGTGCTCG ACAAGGCGAT CCTGCCGCTG ATTCCGTGCA ACCGGCTCGG CGAAGCCGAG GAGATCGCGC GCGCCGTGGT GTTCCTCGCC GGCGACGATG CGGGCTACAT CACCGGTTCG ACGCTCACCA TCAACGGCGG CCAATACATG GTTTGA
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Protein sequence | MTRVALVTGG TRGIGAAISK ALKAAGYKVA ASYAGNDSAA EKFKNETGIP VYKWDVSSFD ACAEGVKKVE AELGPVDVLV NNAGITRDGA FHKMTLEQWN AVINTNLGSL FNMTRQVIEG MRTRKFGRIV NISSINGQKG QFGQVNYSAA KAGDIGFTKA LALENARGGI TVNVICPGYI NTEMVQAVPK DVLDKAILPL IPCNRLGEAE EIARAVVFLA GDDAGYITGS TLTINGGQYM V
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