Gene Rpal_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0526 
SymbolmtgA 
ID6408175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp574985 
End bp575695 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content67% 
IMG OID642710438 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_001989561 
Protein GI192288956 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTGATC CCGTTGCATC TGCGCCTCGC ACCAAGCGTG TGGTTCGCAT TGTCATCTTG 
GTGGCGCTCG CGCTGCTGGC TCTGCCTTAT CTCCTCACCA TCCTGTATGG CGGCGGCCAG
CCGGTCTCGA CCCTGATGCT GTGGCGCTGG GCCACCGGGG CGCCGGTCAG CCGCACCTGG
ATCGACATCG AGAATATCTC GCCGGCGCTG CCGCGCAGCG TGGTGGCGGC CGAGGACGCC
AAGTTCTGCA GCCATCACGG CATTGACTGG GATTCGGTGC GCGACGTGAT CGACGACATG
CAGGACGGCG AGGCCAGCCG CGGCGGCTCG ACCATCACTC AGCAGGTCGC AAAGAACCTG
TTCCTGTGGC CGGGCCGCAG CATGATCCGT AAGGCGCTCG AGGCGCCGCT GGCGCTGTGG
ATCGACTTCG TGCTGCCCAA GCAGCGGATT CTCGAAATCT ACCTCAACAT CGCCGAATGG
GGGCCGGACG GTCAGTTTGG CGCCATGGCC GGCGCCGACT ATGCGTTTGG CCGCTCCGCC
GCGCAGTTGT CCGCCAAGGA GGCTGCAACG CTCGCGGCGA TTCTGCCCAA TCCACGGGTC
CGCAGCGCGA AAGCCCCAGG TCCGGGCGTT CGCCGCCTTG CCGCCACTTA CGTGGCCCGT
GCGCGAGCGG CCGAGCTGCG GCAGTGCTGG CGTGAAAATC GTGAGTCCTG A
 
Protein sequence
MSDPVASAPR TKRVVRIVIL VALALLALPY LLTILYGGGQ PVSTLMLWRW ATGAPVSRTW 
IDIENISPAL PRSVVAAEDA KFCSHHGIDW DSVRDVIDDM QDGEASRGGS TITQQVAKNL
FLWPGRSMIR KALEAPLALW IDFVLPKQRI LEIYLNIAEW GPDGQFGAMA GADYAFGRSA
AQLSAKEAAT LAAILPNPRV RSAKAPGPGV RRLAATYVAR ARAAELRQCW RENRES