Gene Rpal_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0524 
Symbol 
ID6408173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp573263 
End bp573949 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content66% 
IMG OID642710436 
Productprotein of unknown function DUF1345 
Protein accessionYP_001989559 
Protein GI192288954 
COG category[S] Function unknown 
COG ID[COG4291] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAGC ACCCGGACGA CGATCCGCTG CTGCTTCGCT TTCGGAAGCT GCCGCGGATC 
GTTCGCCTGG TGTATTCGCG GCCGCGGCTG TTCGCGTCGA TCGCGATCGG CGTGGTCGCA 
TTCGCACTGC TACCGGGCTG GCTTCGACCG GTGACGCGCG CGCTGATCGG CTGGGACGTC 
TCGATCATCG TGTATCTGGC GCTGGCCTAC ACGATGATGG CACGCTGCGG CGTCGCCTAC 
ATCCGGCGCA ATGCGGTGCT GCAGGACGAC GGCCGTTTCC TGATTCTGAT GGTCACCGCG 
ATCGGCGCCT ACGCCACCAT CGCGGCGATC GTCACCGAAC TCGGCACCGC CCATCGCGGC 
GCCGCCGAGC TGGCGCTCGC CACCTTCACC ATCGCGCTGT CCTGGGCGGC CGTGCACACC 
ACCTTCGCGC TCCACTACGC GCACGAATAT TATCGCGGCG ACCGCGAGGG CGGGCTGGCG 
TTTCCGGGCA GCGACGAGCA CACCGAGCCC GACTATTGGG ACTTCGTGTA TTTCTCGTTC 
GTGATCGGGA TGACCGCGCA GGTGTCGGAT GTCGGCATCA CCGACCGGAC GATCCGCCGC 
ACTGCGACCG CGCACGGCGT CGTATCGTTC GTGTTCAACA CCGCCTTGGT GGCGCTAATG 
GTCAACATCG CGGCGAGCGC GATCTGA
 
Protein sequence
MTEHPDDDPL LLRFRKLPRI VRLVYSRPRL FASIAIGVVA FALLPGWLRP VTRALIGWDV 
SIIVYLALAY TMMARCGVAY IRRNAVLQDD GRFLILMVTA IGAYATIAAI VTELGTAHRG 
AAELALATFT IALSWAAVHT TFALHYAHEY YRGDREGGLA FPGSDEHTEP DYWDFVYFSF 
VIGMTAQVSD VGITDRTIRR TATAHGVVSF VFNTALVALM VNIAASAI