| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0520 |
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| Symbol | ispG |
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| ID | 6408169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 567708 |
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| End bp | 569003 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710432 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001989555 |
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| Protein GI | 192288950 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGC TCGAAAATCC GCTGCGAGAC GACGTCGCCG GCCCCGCGCC GCGGCACCAA
ACCACCCAGG TCATGGTCGG CGATGTGGCC GTCGGCGGCG GTGCCCCGAT CGTCGTTCAG
TCGATGACCA ATACCGACAC CGCGGATGTC GAGGGCACCA TCAAGCAGAT CGCCGCGCTG
GCCCGGGCCG GTTCGGAGAT GGTCCGGATC ACCGTCGATC GCGAGGAAGC GGCCGCCGCC
GTCCCGCACA TCCGCGACGG CATCCGCAAG CTAGGCCTGA CCACGCCGAT CATCGGCGAC
TTCCATTACA TCGGCCACAA GCTGCTCGCC GAATACCCGG CGTGCGCCGA GGCGCTCGAC
AAGTACCGGA TCAATCCGGG CAATGTCGGC TTCAAGAACA AGCGTGACAC GCAGTTCGCC
GACATCGTCG AGATCGCAAT CAAGAACAAT AAGGCGGTCC GCATCGGCGC CAATTGGGGT
TCGCTCGACC AGGAGCTGCT CACCAAGCTG ATGGACGAGA ACGCTGCGTC GGCCAATCCG
CGCGACGTCC GCGCCGTCAC CCGCGAGGCG ATGGTCCAGT CGGCGCTGCT GTCGGCCGCG
CGCGCCGAAG AGATCGGCTT GCCGAAGAAC AAGATGATCC TGTCGGCCAA GGTCTCGGCG
GTGCAGGACC TGATCGCCGT GTACCAGGAT CTCGCCTCGC GCTCCGATTA CGCGATCCAC
CTCGGCCTCA CCGAGGCTGG CATGGGCTCG AAGGGCATCG TCGCATCGTC CGCGGCGCTC
GGCATCCTGC TGCAGCAGGG CATCGGTGAC ACCATTCGGA TTTCGCTGAC CCCCGAGCCG
GGCGGTGACC GCACCCGCGA GGTTCAGGTT GGGCAGGAAC TGCTGCAGAC CATGGGCTTC
CGCACCTTCG TGCCGCTGGT TGCGGCCTGC CCGGGCTGCG GCCGCACCAC CTCGACGACG
TTCCAGGAGC TGGCGCGCTC GATCCAGGAT TTCATCCGCG ACGAGATGCC GGAGTGGCGC
AGCCGCTATC CGGGCGTCGA GAATCTCAAC GTTGCGGTGA TGGGCTGCAT CGTCAACGGC
CCGGGCGAAA GCAAGCACGC CAATATCGGC ATTTCGCTGC CCGGCACCGG CGAAACCCCG
GCGGCGCCGG TGTTCGTCGA CGGCGAGAAA TTCCGTACCC TGCGCGGCGA GAATATCGCG
GCCGACTTCA AGGCGCTGGT GATCGACTAC ATCGAGCAGC GCTACGGCGC GACGCCGAAG
CCCGGTGCCG CCCAGATGGT ACCGGCGGCG GAGTAA
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| Protein sequence | MNKLENPLRD DVAGPAPRHQ TTQVMVGDVA VGGGAPIVVQ SMTNTDTADV EGTIKQIAAL
ARAGSEMVRI TVDREEAAAA VPHIRDGIRK LGLTTPIIGD FHYIGHKLLA EYPACAEALD
KYRINPGNVG FKNKRDTQFA DIVEIAIKNN KAVRIGANWG SLDQELLTKL MDENAASANP
RDVRAVTREA MVQSALLSAA RAEEIGLPKN KMILSAKVSA VQDLIAVYQD LASRSDYAIH
LGLTEAGMGS KGIVASSAAL GILLQQGIGD TIRISLTPEP GGDRTREVQV GQELLQTMGF
RTFVPLVAAC PGCGRTTSTT FQELARSIQD FIRDEMPEWR SRYPGVENLN VAVMGCIVNG
PGESKHANIG ISLPGTGETP AAPVFVDGEK FRTLRGENIA ADFKALVIDY IEQRYGATPK
PGAAQMVPAA E
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