| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0513 |
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| Symbol | |
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| ID | 6408162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 558419 |
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| End bp | 561142 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642710425 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001989548 |
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| Protein GI | 192288943 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCC GCCCCGACAT CGCTCTACCG CCCGACGCCG CTCCGCCTCC GGAGGCGCCC
GCCAAAATGT CGCCGATGAT GGAGCAGTAC CACGAGATCA AAGCCGCCAA TCCTGGCCTG
TTGCTGTTCT ACCGGATGGG CGATTTCTAC GAGCTGTTCT TCGAGGATGC CGAAATCGCG
TCACGCGCGC TCGGTATTAC CCTGACCAAG CGCGGCAAGC ATCTCGGCGC CGACATTCCG
ATGTGCGGTG TGCCGGTCGA GCGCTCCGAC GACTACCTGC ACCGGCTGAT CGCGCTGGGT
CACCGCGTCG CTGTGTGCGA GCAGACCGAA GACCCGGCCG CGGCGCGCGC CCGCAAGAGC
GTGGTGCGGC GCGACGTGGT GCGGCTGATC ACGCCCGGTA CGCTGACCGA AGATACCCTG
CTCGACGCCC GCGCCAACAA CTACCTGCTG GCGATCGCGC GCGCCCGTGG CTCGGCCGGC
GCCGATCGCA TCGGGCTCGC CTGGATCGAC ATCTCGACTG GCGAATTCTG CGTCACCGAG
TGCACGACCG CAGAACTCGC CGCGACGCTG GCGCGGATCA ATCCGAACGA AGCCATCGTG
CCGGACGCGC TGTACAGCGA CACAGAACTC GCCCCGACCT TGCGCGAGCT CGCCGCCGTC
ACGCCGCTGA CGCGTGACGT GTTCGATTCC GCCACCGCCG AGCGGCGGCT GTGCGATTAC
TTCGCTGTCG CCACCATGGA CGGCCTCGCC GCGCTGTCAC GGCTGGAAGC GACCGCCGCC
GCGGCCTGCG TCACCTATGT CGACCGTACC CAGCTCGGCA AACGGCCGCC GCTGTCGCCG
CCGTCACGCG AAGCCGCCGG CACCACGATG GCGATCGACC CGGCGACCCG CGCCAATCTC
GAACTCACCC GCACGCTCGC CGGCGAACGC CGCGGCTCGC TGCTCGACGC GATCGACTGC
ACGGTTACAG CCGCAGGATC TCGCCTCTTG GCGCAGCGGC TCGCCGCGCC GCTGACCGAT
GCGGCGGCGA TCGCGCGGCG GCTCGACGCG GTCGAAGCCT TCACCGGGGA TGCGGGACTT
CGCGAACAGA TCCGCAGCTC GCTGCGTGCG GCGCCCGACA TGGCGCGTGC ACTGGCGCGG
CTGTCGCTCG GCCGCGGCGG CCCGCGGGAT CTCGCGAACT TGCGCGATGG CATCCGCGCT
GCCGACGAGG TGATTGCGCA GCTCGGCCAG CTCGCAAGCC CGCCGCAGGA GATCGCGAGC
GCGATGGCGG CGCTGCAGCG GCCGTCACGC GCATTGTGCG CCGAGCTCGG CCGCGCGCTC
GCCGACGATC TGCCGCTTCT CAAGCGCGAC GGCGGCTTCG TGCGCGAAGG CTACGAGCCG
GCGCTCGACG AGACCCGCAA GCTGCGCGAC GCCTCGCGGC TGGTGGTGGC GTCGATGCAG
GCGCGCTACG CCGACGACAC CGGGATCAAG GCGCTGAAGA TCCGGCACAA CAACGTGCTC
GGTTACTTCG TCGAGGTCTC GGCGCAGCAC GGCGACAAGT TGATGGCGCC GCCACTGAAC
GCCACTTTCA TCCATCGCCA GACGCTGGCC GGGCAGGTGC GCTTCACCAC CGCCGAACTC
GGCGAGATCG AGGCCAAGAT CGCCAATGCG GGCGACCGCG CACTCGGGCT GGAGCTGGAG
ATCTTCGACC GCCTCGCCGC GATGATCGAT GCGGCCGGTG AAGACCTGCG CGCCGCCGCC
CATGCGTTCG CGCTGCTCGA TGTCGCCACC GCGCTCGCCA AGCTCGCCAG CGACGACAAC
TACGTGCGGC CCGAGGTCGA CGAGTCGCTG AGCTTTGCGA TCGAAGGCGG CAGGCATCCG
GTGGTCGAGC AGGCGCTGAA GAAGGCTGGC GAGCCGTTCA TCGCCAATGC CTGCGACCTG
TCGCCCGGCC CGGCGCAGAC CAACGGCCAG ATCTGGCTGC TGACCGGCCC GAACATGGCC
GGTAAGTCGA CCTTCCTGCG CCAGAACGCG CTGATCGCCC TGCTCGCCCA GGTCGGCAGC
TTCGTGCCGG CGATCCGGGC ACGGATCGGC ATCGTCGACC GGCTGTTCTC GCGCGTCGGC
GCCGCCGACG ACCTCGCCCG CGGCCGTTCG ACCTTCATGG TCGAGATGGT CGAGACCGCC
GCGATCCTGA ACCAGGCCTC CGAACGGGCG CTGGTGATCC TCGACGAGAT CGGCCGCGGC
ACCGCGACGT TCGACGGCCT CTCGATCGCC TGGGCGGCGA TCGAGCACCT GCACGAACAG
AACAGGTGTC GTTCGCTGTT CGCCACGCAC TACCATGAAC TGACCGCACT GTCGGCCAAG
CTGCCGCGGC TGTTCAACGC CACCGTGCGG GTCAAGGAAT GGCGCGGCGA GGTGGTGTTT
CTGCACGAGG TGCTGCCGGG CTCCGCCGAC CGCTCCTACG GCATTCAGGT CGCCAAGCTG
GCGGGGCTCC CCCCCAGCGT GGTGAGCCGC GCGAAGGCCG TGCTGGCCAA GCTCGAAGCC
AACGACCGCG GTCAGCCGAA GACGCTGATC GACGACCTGC CGCTGTTCGC CATCACGGCT
CGCGCACCCG CCGAAGCCGC CCCACCGAGC GAGGCCGAGC AGCTGATCGA CGCGGTCAAG
GCGCTGCATC CCGACGAGAT GACCCCGCGC GAGGCGCTGG ATGCGTTGTA CGCCCTGAAG
GCGAAGCTAC CGAAGGCCGA CTGA
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| Protein sequence | MTIRPDIALP PDAAPPPEAP AKMSPMMEQY HEIKAANPGL LLFYRMGDFY ELFFEDAEIA
SRALGITLTK RGKHLGADIP MCGVPVERSD DYLHRLIALG HRVAVCEQTE DPAAARARKS
VVRRDVVRLI TPGTLTEDTL LDARANNYLL AIARARGSAG ADRIGLAWID ISTGEFCVTE
CTTAELAATL ARINPNEAIV PDALYSDTEL APTLRELAAV TPLTRDVFDS ATAERRLCDY
FAVATMDGLA ALSRLEATAA AACVTYVDRT QLGKRPPLSP PSREAAGTTM AIDPATRANL
ELTRTLAGER RGSLLDAIDC TVTAAGSRLL AQRLAAPLTD AAAIARRLDA VEAFTGDAGL
REQIRSSLRA APDMARALAR LSLGRGGPRD LANLRDGIRA ADEVIAQLGQ LASPPQEIAS
AMAALQRPSR ALCAELGRAL ADDLPLLKRD GGFVREGYEP ALDETRKLRD ASRLVVASMQ
ARYADDTGIK ALKIRHNNVL GYFVEVSAQH GDKLMAPPLN ATFIHRQTLA GQVRFTTAEL
GEIEAKIANA GDRALGLELE IFDRLAAMID AAGEDLRAAA HAFALLDVAT ALAKLASDDN
YVRPEVDESL SFAIEGGRHP VVEQALKKAG EPFIANACDL SPGPAQTNGQ IWLLTGPNMA
GKSTFLRQNA LIALLAQVGS FVPAIRARIG IVDRLFSRVG AADDLARGRS TFMVEMVETA
AILNQASERA LVILDEIGRG TATFDGLSIA WAAIEHLHEQ NRCRSLFATH YHELTALSAK
LPRLFNATVR VKEWRGEVVF LHEVLPGSAD RSYGIQVAKL AGLPPSVVSR AKAVLAKLEA
NDRGQPKTLI DDLPLFAITA RAPAEAAPPS EAEQLIDAVK ALHPDEMTPR EALDALYALK
AKLPKAD
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