| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0510 |
|---|
| Symbol | |
|---|
| ID | 6408159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 552515 |
|---|
| End bp | 553951 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642710422 |
|---|
| Product | protein of unknown function DUF949 |
|---|
| Protein accession | YP_001989545 |
|---|
| Protein GI | 192288940 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3034] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAAAA GCCCGCTTGT ACGCGCGCTG ATGCTGACAG CTGCGCTCGC GACGATGCCT
TTGCTCGCCG GCTGCAACAG CGATCAGATG GCGCTGGCCA CCAATGCCAA GGCCAATCAG
CCGGTGCCGC CCAAGCTGGT CGCGGCGATG CAGGAAAAGA ACATGGACCT GCAGTCGCCG
ATCCTGGTGC GACTGTTCAA GCAGGAAGCC GAGCTCGAGG TCTGGAAGCA GGACCGCACC
GGCGTTTTCC AGCTGCTCAA GTCCTATCCG ATCTGCCGCT GGTCCGGCGA TCTCGGTCCG
AAGATCCGCG AAGGCGATCG TCAGGCGCCC GAGGGGTTCT ATTCGATCTC GCCCGGCCAG
ATGAACCCGC AGTCCTCGTA TTATCTGTCG TTCAACACCG GCTATCCGAA TGCGTTCGAC
AAATCGCTCG GCCGCACCGG CTCGCAGCTG ATGGTGCACG GCGATTGCTC GTCGCGCGGT
TGCTACGCGA TGACCGACGA GCAGATCGCC GAGATCTACG CGCTGGGGCG CGAGTCGTTC
TTCGGCGGCC AGCGCGCGTT CCAACTGCAG GCCTATCCCT TCAAGATGAC TCCGGCGAAT
TTCGCCAAGC ATCGCAACAA CCCGAACATG CCGTTCTGGA AGATGCTGAA GGAAGGCTAC
GACCATTTCG AAGTCACCCG GCAGGAGCCG AAGGTTGACT TCTGCGAGCA TAAATACGTG
TTCGACGCGG CGCCGCCGTC CGGTTCGAGC AGGCCGCTGC AGTTCAACGC TTCGGCCAAG
TGTCCGACCT ATGAGGTCCG TCCCGACATC GCCGAGGCGG TGCGCGAGAA GGACAAGCAG
GACAACATCA AGATCGCCGA GCTGGTCGCC AAAGGCACGC CGGTGGCCCG GCTGAACACC
GGCATCGACG GCGGCATGAA CCACGTGTTC GCCTCGAAGA TTCCGGACGC ATCGACCGGG
CTGTCGGAAG TGCCCGAGGA CAAGTCGCTG GCGGTTGCCT CGTTCGACCG CGCACCCGGC
ACCATTCCGC CGACTGTGAA TCCGCCGCGT CCCTCGGACA ATCTGCTGGT CGCCGCTCCT
GCGGAGTCGA GTGCATCCGC CGCGAAGGCG CGCGTCGCCT CGGCGTCGAA GGATGACATC
GGTGGTCTGC TCGCCGGCAG CCGCAAACCC GGCAACGAGT CGACCGCGTC CGCCCGTCCG
GCTCCGTCCG CCCCGGTCAG CACCGCGGCT CGCCACGAGC CAGCGCCGCG TCCGCAAGGC
GCCGCGCCGA AGGCTGCCGA GACTAAGCAG GCCGCCGCGT CGCGCCCGCC GTTGAAGCCG
AGCGTCGATG CCGAAACCAC CTCGTCAGCC CCCGCCAGGC CGTCCGGCAT GATCTCCGGC
GGCGCGCCGG TGGTGTCGTC GAATTCGTTC GACAGCCGGT TCTCGGCGTT CCGCTAA
|
|---|
| Protein sequence | MKKSPLVRAL MLTAALATMP LLAGCNSDQM ALATNAKANQ PVPPKLVAAM QEKNMDLQSP
ILVRLFKQEA ELEVWKQDRT GVFQLLKSYP ICRWSGDLGP KIREGDRQAP EGFYSISPGQ
MNPQSSYYLS FNTGYPNAFD KSLGRTGSQL MVHGDCSSRG CYAMTDEQIA EIYALGRESF
FGGQRAFQLQ AYPFKMTPAN FAKHRNNPNM PFWKMLKEGY DHFEVTRQEP KVDFCEHKYV
FDAAPPSGSS RPLQFNASAK CPTYEVRPDI AEAVREKDKQ DNIKIAELVA KGTPVARLNT
GIDGGMNHVF ASKIPDASTG LSEVPEDKSL AVASFDRAPG TIPPTVNPPR PSDNLLVAAP
AESSASAAKA RVASASKDDI GGLLAGSRKP GNESTASARP APSAPVSTAA RHEPAPRPQG
AAPKAAETKQ AAASRPPLKP SVDAETTSSA PARPSGMISG GAPVVSSNSF DSRFSAFR
|
|---|
| |