| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0507 |
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| Symbol | |
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| ID | 6408156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 549316 |
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| End bp | 550335 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710419 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_001989542 |
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| Protein GI | 192288937 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCGAC CGCGAACCAC ATCCAGGACT GCCGCGCTGC CCGAGCCGGA GGCTCAGGCT
GCGCCGCTAC GCCCGGCTTC CTATTCGGAT GCCGGGCTGA CCGAGCTGTT TCTCGACATG
ATCGCGGCGG AGCAGGGCGC TTCCGCCAAC ACGCTCGATG CCTATCGGCG CGATCTGGCG
GATCTATCGC ACTTTCTGTC GCGCCGCCGG CTCAGCATCG GCTCCGCCGA CACCGCGGCG
CTGCGCAGTT ATCTGGCGGA TCTCGACAAC CGCGGCTTTG CCACCTCCAG CGTGGCGCGG
CGGTTGTCGG CGCTGCGGCA TTTGTTCCGG TTTCTGCTTA GCGAGCGGAT TCGCGCTGAC
GATCCGGCCG CGATCCTGGC CGGGCCAAAG CGCGGCCGCA GCCTGCCGAA AGTGCTGTCG
ATCGCGGATG TCGACCGGCT GCTCGCCTGT GCGCGGCAGG AGATCGATGC CGCAGAAGGT
GGCGCGCGGC TGCGTGCGGC ACGGCTGAAC TGCCTGCTCG AAGTGCTCTA CGCCACCGGG
TTGCGCGTCT CGGAACTGGT GTCGCTGCCG CTGTCGGCGG CCCGGCGCGA TGCCCGGATG
ATCGTGGTGC GCGGCAAGGG CGACAAAGAG CGGCTGGTGC CGCTCAACGC CGGCGCCAAA
CAGGCGATGG CGCGCTATCT GGAAGAGGTC GCGGTGGCCA CCAAAGAAAC CAAAGGCGCG
CCTGCCTCGA AATGGCTGTT CCCGTCCTTC GGCGAGAGCG GGTATCTCAC CCGGCAGCAT
TTTGCGCGGG ATCTGAAGGA TTTGGCCGCG CGGGCCGGGC TGTCGCCGCG GCTGGTTAGC
CCGCACGTGC TGCGCCATGC CTTTGCCAGC CACCTGCTGC ACAACGGCGC CGACCTGCGG
ATCGTGCAGA CGCTGCTCGG CCACAGCGAC ATCTCGACCA CCCAGATCTA CACCCATGTG
GTCGAGGAGC GCCTGAAGAG CCTGGTGCGC GACCTCCATC CGCTCGGCGA AGGCCGCTGA
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| Protein sequence | MRRPRTTSRT AALPEPEAQA APLRPASYSD AGLTELFLDM IAAEQGASAN TLDAYRRDLA
DLSHFLSRRR LSIGSADTAA LRSYLADLDN RGFATSSVAR RLSALRHLFR FLLSERIRAD
DPAAILAGPK RGRSLPKVLS IADVDRLLAC ARQEIDAAEG GARLRAARLN CLLEVLYATG
LRVSELVSLP LSAARRDARM IVVRGKGDKE RLVPLNAGAK QAMARYLEEV AVATKETKGA
PASKWLFPSF GESGYLTRQH FARDLKDLAA RAGLSPRLVS PHVLRHAFAS HLLHNGADLR
IVQTLLGHSD ISTTQIYTHV VEERLKSLVR DLHPLGEGR
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