Gene Rpal_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0505 
Symbol 
ID6408154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp548412 
End bp549014 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content68% 
IMG OID642710417 
Productshikimate kinase 
Protein accessionYP_001989540 
Protein GI192288935 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAA CCGTACCGAC GGCTGCTGCC GGCAGGTCGC CCCAGGAAGC CGAGATCGTC 
GCGGCGCTGG GCGATCGCCC GGTCGTGCTC ATCGGCATGA TGGGCGCCGG CAAATCCACC 
GTCGGACGCC GGCTGGCGCT GCGACTCGGG CTGCCGTTTC TCGACGCCGA CACCGAGATT 
GAATCGGCCG CCGCGATGAC CATCCCGGAG ATCTTCGAAA CCCACGGCGA GCCGCATTTT 
CGCGACGGCG AGGCCCGGGT GATTTCGCGG CTGCTCGACG GCGGCACCAA GGTGCTGGCG 
ACCGGTGGTG GGGCCTTCAT GCGCGAGGAA ACTCGTGACC GGATTCGCGA GAAGGCGATC 
TCGATGTGGC TCGAGGCGGA GGCCGACGTG ATCCTGCGCC GGGTCAAGCG CCGCGCGGAC 
CGGCCGCTGC TGAAGACGCC AGATCCGGCC GGCACCATCG CCCGGCTGAT CGCCGAACGC 
TATCCGCTAT ACCGCGAAGC CGATATCACC ATCGCGTCCC GCGACGTGCC GCACGAGAAG 
ATCGTCGACG AATGCGTCGC GGCGCTCCAC GACTATCTGT GCGCCGCGCC GCCCCAACCT 
TGA
 
Protein sequence
MSETVPTAAA GRSPQEAEIV AALGDRPVVL IGMMGAGKST VGRRLALRLG LPFLDADTEI 
ESAAAMTIPE IFETHGEPHF RDGEARVISR LLDGGTKVLA TGGGAFMREE TRDRIREKAI 
SMWLEAEADV ILRRVKRRAD RPLLKTPDPA GTIARLIAER YPLYREADIT IASRDVPHEK 
IVDECVAALH DYLCAAPPQP