| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0497 |
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| Symbol | |
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| ID | 6408146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 540522 |
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| End bp | 542426 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642710409 |
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| Product | cobalt chelatase, pCobT subunit |
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| Protein accession | YP_001989532 |
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| Protein GI | 192288927 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
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| TIGRFAM ID | [TIGR01651] cobaltochelatase, CobT subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA CGACCAACAG CAAACTCCGC ACCGGATCGA AGGAAGCGCC GACCGAGCCG
TTCAAGCGCG CCGTGACCTC GTGCCTGCGC GCCATCGCCA AGGCGCCGGA GCTGGAGGTT
ACTTTCGCAG CCGAGCGCCC CGGCCTCGCG CCCGGCAAGG CCCGGCTCCC CGAGCCGGCG
CGCAAGATGA GCAAGCGCGA CGCCGCGATT GTGCGCGGCC ATGCCGACTC GATCGCGCTG
AAGCTCGCCT GTCACGACCC GAAAGTGCAT CGCAAGCTGA TGCCGGGTAA TCCGCAGGCC
CGCGGCGTGT TCGAAGCGGT CGAGCAGGCG CGCGTCGAAG CGCTCGGCGC GCGGCGGATG
GCGGGCGTCG CCAAGAACCT CACCGCGATG CTCGACGATC ATTTCCATCG CGGCAAGTTC
GACGAGATCA CCGACCGCGC GGATGCGCCG CTGTCGGATG CGCTGGCTAT GCTGGTGCGC
GAGCGGCTGA CGGGTCTGGC GCCGCCCACG GCGGCCAAGA AACTGGTCGA CCTGTGGCGG
CCGGTGCTCG AAGACAAGCT CGGTCCGCGG CTCGATCAGC TCGAACACTT CGCCGACAAC
CAGGCCAAGT TCGGCGACGT GATCCACGAC ATGCTCGACG CACTCGAGCT TGGCGATGAT
CGCGACACCG AGACCGACGA AGACGAGAGC CAGGACGATA AGCAGGAAGG CGAGAACGAT
CAGTCCGGCG CCGAGGGCGA GCCGCAGGGC GAAGCCGCGC AGGAGATGAG CGCCGAGCAG
GCCGAAGCGA CCAGCGACGA GGTCAGCGAC AGCCAGATGG AAAGCGCCCA GGCATCGACC
TCCGACGCCT TCGACGATTC CGAACTCGGC GAGGACGAAA CGCCGGGCGA AGCCACCCGT
CCGCACAATC GCGGCGCCAA CGAGCCGCGC GGGCCGGAGT ATCACGCCTT CGCGCCGAAG
TTCGACGAAA TCGTCGCCGC CGAAGATTTG TGCGACCACG ACGAACTGGA ACGGCTGCGC
AGCTATCTGG ACAAGCAGTT GGCGCATCTG CAGGGGATCG TCGCCCGCCT CGCCAACCGG
CTGCAGCGCC GGCTGATGGC GCAGCAGAAC CGCGCCTGGG ACTTCGACCT CGAAGAAGGC
ATTCTCGATC CGGCGCGCCT GTCACGCGTG GTGATCGATC CGTTCCATCC GCTGTCGTTC
ATGAGCGAGA AGGAAGCGAC CTTCCGCGAC ACCGTAGTGA CGCTGCTGCT CGACAATTCC
GGTTCGATGC GCGGTCGCCC GATCACGGTG GCGGCGACCT GCGCCGACAT TCTGGCGCGG
ACGCTGGAGC GTTGCGGCGT CAAGGTCGAG ATCCTCGGCT TCACCACGCG CGCCTGGAAG
GGCGGACAAT CGCGCGAGGC TTGGCTCGCC GCCGGCAAGC CGGCCAATCC GGGCCGCCTC
AACGATCTCC GGCATATCAT CTACAAGTCG GCGGACGCGC CGTGGCGCCG GGCTCGCAAG
AACCTCGGGC TGATGATGCG CGAGGGCCTG CTCAAGGAGA ACATCGACGG CGAAGCGCTC
GACTGGGCGC ATAAGCGTCT GCTCGGCCGC CCCGAGCAGC GCAAGATCCT GATGATGATC
TCGGACGGCG CCCCGGTCGA CGACTCGACG CTGTCGGTCA ATCCCGGCAA CTACCTCGAA
CGGCACCTGC GCCACATCAT CGAGGAGATC GAGACCCGCT CGCCGGTGGA GCTGATCGCG
ATCGGCATCG GCCACGACGT GACGCGCTAC TATCGTCGCG CCGTGACCAT CGTCGACGCC
GAAGAGCTCG GCGGCGCCAT CACCGAGAAG CTCGCCGAGC TGTTCAGCGA GACCGCCACC
CCGGCCGCGA CACCGGGCCC GCGACGCCAC CGTCTGCATT CGTGA
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| Protein sequence | MSTTTNSKLR TGSKEAPTEP FKRAVTSCLR AIAKAPELEV TFAAERPGLA PGKARLPEPA
RKMSKRDAAI VRGHADSIAL KLACHDPKVH RKLMPGNPQA RGVFEAVEQA RVEALGARRM
AGVAKNLTAM LDDHFHRGKF DEITDRADAP LSDALAMLVR ERLTGLAPPT AAKKLVDLWR
PVLEDKLGPR LDQLEHFADN QAKFGDVIHD MLDALELGDD RDTETDEDES QDDKQEGEND
QSGAEGEPQG EAAQEMSAEQ AEATSDEVSD SQMESAQAST SDAFDDSELG EDETPGEATR
PHNRGANEPR GPEYHAFAPK FDEIVAAEDL CDHDELERLR SYLDKQLAHL QGIVARLANR
LQRRLMAQQN RAWDFDLEEG ILDPARLSRV VIDPFHPLSF MSEKEATFRD TVVTLLLDNS
GSMRGRPITV AATCADILAR TLERCGVKVE ILGFTTRAWK GGQSREAWLA AGKPANPGRL
NDLRHIIYKS ADAPWRRARK NLGLMMREGL LKENIDGEAL DWAHKRLLGR PEQRKILMMI
SDGAPVDDST LSVNPGNYLE RHLRHIIEEI ETRSPVELIA IGIGHDVTRY YRRAVTIVDA
EELGGAITEK LAELFSETAT PAATPGPRRH RLHS
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