Gene Rpal_0497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0497 
Symbol 
ID6408146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp540522 
End bp542426 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content67% 
IMG OID642710409 
Productcobalt chelatase, pCobT subunit 
Protein accessionYP_001989532 
Protein GI192288927 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) 
TIGRFAM ID[TIGR01651] cobaltochelatase, CobT subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCA CGACCAACAG CAAACTCCGC ACCGGATCGA AGGAAGCGCC GACCGAGCCG 
TTCAAGCGCG CCGTGACCTC GTGCCTGCGC GCCATCGCCA AGGCGCCGGA GCTGGAGGTT
ACTTTCGCAG CCGAGCGCCC CGGCCTCGCG CCCGGCAAGG CCCGGCTCCC CGAGCCGGCG
CGCAAGATGA GCAAGCGCGA CGCCGCGATT GTGCGCGGCC ATGCCGACTC GATCGCGCTG
AAGCTCGCCT GTCACGACCC GAAAGTGCAT CGCAAGCTGA TGCCGGGTAA TCCGCAGGCC
CGCGGCGTGT TCGAAGCGGT CGAGCAGGCG CGCGTCGAAG CGCTCGGCGC GCGGCGGATG
GCGGGCGTCG CCAAGAACCT CACCGCGATG CTCGACGATC ATTTCCATCG CGGCAAGTTC
GACGAGATCA CCGACCGCGC GGATGCGCCG CTGTCGGATG CGCTGGCTAT GCTGGTGCGC
GAGCGGCTGA CGGGTCTGGC GCCGCCCACG GCGGCCAAGA AACTGGTCGA CCTGTGGCGG
CCGGTGCTCG AAGACAAGCT CGGTCCGCGG CTCGATCAGC TCGAACACTT CGCCGACAAC
CAGGCCAAGT TCGGCGACGT GATCCACGAC ATGCTCGACG CACTCGAGCT TGGCGATGAT
CGCGACACCG AGACCGACGA AGACGAGAGC CAGGACGATA AGCAGGAAGG CGAGAACGAT
CAGTCCGGCG CCGAGGGCGA GCCGCAGGGC GAAGCCGCGC AGGAGATGAG CGCCGAGCAG
GCCGAAGCGA CCAGCGACGA GGTCAGCGAC AGCCAGATGG AAAGCGCCCA GGCATCGACC
TCCGACGCCT TCGACGATTC CGAACTCGGC GAGGACGAAA CGCCGGGCGA AGCCACCCGT
CCGCACAATC GCGGCGCCAA CGAGCCGCGC GGGCCGGAGT ATCACGCCTT CGCGCCGAAG
TTCGACGAAA TCGTCGCCGC CGAAGATTTG TGCGACCACG ACGAACTGGA ACGGCTGCGC
AGCTATCTGG ACAAGCAGTT GGCGCATCTG CAGGGGATCG TCGCCCGCCT CGCCAACCGG
CTGCAGCGCC GGCTGATGGC GCAGCAGAAC CGCGCCTGGG ACTTCGACCT CGAAGAAGGC
ATTCTCGATC CGGCGCGCCT GTCACGCGTG GTGATCGATC CGTTCCATCC GCTGTCGTTC
ATGAGCGAGA AGGAAGCGAC CTTCCGCGAC ACCGTAGTGA CGCTGCTGCT CGACAATTCC
GGTTCGATGC GCGGTCGCCC GATCACGGTG GCGGCGACCT GCGCCGACAT TCTGGCGCGG
ACGCTGGAGC GTTGCGGCGT CAAGGTCGAG ATCCTCGGCT TCACCACGCG CGCCTGGAAG
GGCGGACAAT CGCGCGAGGC TTGGCTCGCC GCCGGCAAGC CGGCCAATCC GGGCCGCCTC
AACGATCTCC GGCATATCAT CTACAAGTCG GCGGACGCGC CGTGGCGCCG GGCTCGCAAG
AACCTCGGGC TGATGATGCG CGAGGGCCTG CTCAAGGAGA ACATCGACGG CGAAGCGCTC
GACTGGGCGC ATAAGCGTCT GCTCGGCCGC CCCGAGCAGC GCAAGATCCT GATGATGATC
TCGGACGGCG CCCCGGTCGA CGACTCGACG CTGTCGGTCA ATCCCGGCAA CTACCTCGAA
CGGCACCTGC GCCACATCAT CGAGGAGATC GAGACCCGCT CGCCGGTGGA GCTGATCGCG
ATCGGCATCG GCCACGACGT GACGCGCTAC TATCGTCGCG CCGTGACCAT CGTCGACGCC
GAAGAGCTCG GCGGCGCCAT CACCGAGAAG CTCGCCGAGC TGTTCAGCGA GACCGCCACC
CCGGCCGCGA CACCGGGCCC GCGACGCCAC CGTCTGCATT CGTGA
 
Protein sequence
MSTTTNSKLR TGSKEAPTEP FKRAVTSCLR AIAKAPELEV TFAAERPGLA PGKARLPEPA 
RKMSKRDAAI VRGHADSIAL KLACHDPKVH RKLMPGNPQA RGVFEAVEQA RVEALGARRM
AGVAKNLTAM LDDHFHRGKF DEITDRADAP LSDALAMLVR ERLTGLAPPT AAKKLVDLWR
PVLEDKLGPR LDQLEHFADN QAKFGDVIHD MLDALELGDD RDTETDEDES QDDKQEGEND
QSGAEGEPQG EAAQEMSAEQ AEATSDEVSD SQMESAQAST SDAFDDSELG EDETPGEATR
PHNRGANEPR GPEYHAFAPK FDEIVAAEDL CDHDELERLR SYLDKQLAHL QGIVARLANR
LQRRLMAQQN RAWDFDLEEG ILDPARLSRV VIDPFHPLSF MSEKEATFRD TVVTLLLDNS
GSMRGRPITV AATCADILAR TLERCGVKVE ILGFTTRAWK GGQSREAWLA AGKPANPGRL
NDLRHIIYKS ADAPWRRARK NLGLMMREGL LKENIDGEAL DWAHKRLLGR PEQRKILMMI
SDGAPVDDST LSVNPGNYLE RHLRHIIEEI ETRSPVELIA IGIGHDVTRY YRRAVTIVDA
EELGGAITEK LAELFSETAT PAATPGPRRH RLHS