| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0479 |
|---|
| Symbol | |
|---|
| ID | 6408128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 518290 |
|---|
| End bp | 518586 |
|---|
| Gene Length | 297 bp |
|---|
| Protein Length | 98 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642710391 |
|---|
| Product | transglycosylase-associated protein |
|---|
| Protein accession | YP_001989514 |
|---|
| Protein GI | 192288909 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2261] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.188397 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGAC TGATTTGGAT CCTTGTGGTC GGCTTCGTTG CCGGGATCAT CGCGCGGGTG
TTGTCACCTG GGCCGAACAA TCCGCAAGGA TTCGTTCTCA CCACGGTGCT TGGCATTGCT
GGTGCTTTTC TCGCTACCGC GATCGGGCAG ATGATCGGGC ATTACGGTCC CAATCAGGGG
GCCGGCTTCA TCACCGCGAC GGTCGGCGCG GTGGCGGTCC TGTTCATCTG GAACAGGCTG
GTTGCGCGGC GGGTGATCTC CGATCCCGGT AATCGCTACC CGTATGATCC GCGCTGA
|
|---|
| Protein sequence | MGGLIWILVV GFVAGIIARV LSPGPNNPQG FVLTTVLGIA GAFLATAIGQ MIGHYGPNQG
AGFITATVGA VAVLFIWNRL VARRVISDPG NRYPYDPR
|
|---|
| |