| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0477 |
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| Symbol | |
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| ID | 6408126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 516207 |
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| End bp | 517538 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642710389 |
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| Product | hypothetical protein |
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| Protein accession | YP_001989512 |
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| Protein GI | 192288907 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4961] Flp pilus assembly protein TadG |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.179646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTTTT CGAGGTCGAT AGCTCGCTTT TCTCGTGACC GGCGCGGCAA CATTGCCGTG
ATCTTTGCGC TGGTGCTAGT CCCGCTGATT TCCGCGGTCG GCTGTGCGGT CGATTACAGC
CGCGCCAATG CGCTGCGAAG CAAGCTGCAG GCAGCGGCGG ATGCAGCCTC GGTCGGTGCG
GTGTCGCGGA CGTCGCCGGC CTATGTGGCG GCCGGAGCAA TGTCGGGCGA CGGCGTGATT
TCGTCCGGTG CCGACGACGC GCTGCGAATC TTCAACGGCA ATCTGAACGG CCTGACCGGC
TACACCCTCG CCAGTTCATC GGCGACGGTG ACCAAGGCGT CGGACGTCGT CACCTCTCAG
GTGACGTTCT CGGCCCAGAT CTCCACCATG TTCATGAAGG TGGTCGGAAT GTCGGCCATG
ACGGTGGGCG GTACGTCCAC CGCTACCGCC AGTATGCCGA AGTATATCGA TTTCTATCTC
TTGCTCGACA ATTCGCCGTC GATGGGTGTG GGCGCTACGC CCACCGATGT TTCCGCGATG
ATCGCGGCCA CCGCCAACAA GTCGTCGGAT GATCACTGCG CGTTCGCGTG TCACGACGTC
AACAACAAGA ATAACTACTA CAATCTGGCG AAGGCGCTCG GCATCACCAC CCGGATCGAC
GTGCTGCGCA GCGCCACGCA GCAACTGATG GACACCGCGA GCGCCACTGC GACCTACTCC
AACCAGTTCC GGATGGCGAT CTACGATTTC GGCGCTTCGG CCCAGACTGC TGGGCTGCGC
AATCTGTTCT CGCTGTCGGC GAGCCTGTCG AGCGCCAAGA CTGCGGCGAG CGCGATCGAC
CTGATGACGG TGAAGGGTCA GAACGACAAC AACGACCAGG ACACCAGCTA CACGGCGATC
TTTCCGGCCA TCAATAACGA GATCAGCTCG CCCGGTTCGG GTGTCTCCGG CTCACCGCAG
AAATATTTGT TCTTCGTTTC CGACGGCGTC GCCGACGAAT ACAATCCAAG CTGCCTGAAG
CCGAAGACCG GCAATCGTTG CCAGTCGCCG ATCAATCCTG CGCTGTGCAA GACCTTGAAG
GATCGCGGCA TCAAGATCGC GGTGCTGTAC ACCACCTATC TCAACCTGCC GAGCAACGAC
TGGTACAAGA AGTGGATTGC GCCGTTCAAT GCCGGGCCCT ACGGTCCGTC GCCGAACAGC
GAAATCGCGC AGAACATGGA AGCCTGTGCG TCGCCGGGCT TCTACTTCGA GGTCAGCCCG
ACCCAGGGTA TCGCCGAAGC GATGAACGCG CTGTTCAAGA AGGCTGTCGC CGACGCGCGC
ATCACCAGCT GA
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| Protein sequence | MAFSRSIARF SRDRRGNIAV IFALVLVPLI SAVGCAVDYS RANALRSKLQ AAADAASVGA
VSRTSPAYVA AGAMSGDGVI SSGADDALRI FNGNLNGLTG YTLASSSATV TKASDVVTSQ
VTFSAQISTM FMKVVGMSAM TVGGTSTATA SMPKYIDFYL LLDNSPSMGV GATPTDVSAM
IAATANKSSD DHCAFACHDV NNKNNYYNLA KALGITTRID VLRSATQQLM DTASATATYS
NQFRMAIYDF GASAQTAGLR NLFSLSASLS SAKTAASAID LMTVKGQNDN NDQDTSYTAI
FPAINNEISS PGSGVSGSPQ KYLFFVSDGV ADEYNPSCLK PKTGNRCQSP INPALCKTLK
DRGIKIAVLY TTYLNLPSND WYKKWIAPFN AGPYGPSPNS EIAQNMEACA SPGFYFEVSP
TQGIAEAMNA LFKKAVADAR ITS
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