| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0465 |
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| Symbol | |
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| ID | 6408113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 500867 |
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| End bp | 502360 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710377 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_001989501 |
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| Protein GI | 192288896 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACCCA CCGCCGCCGC ACGCGCCGCC GATCAAGCCG GCTCTCTGCG CGATCGTCTA
AAGGACCCGT CGCTGCTGCG CGAGCAGTGC TATATCGACG GCGCCTGGTC GGGCACGTCG
ACGATCGCGG TGACTAATCC GGCGAGAGGG CAGACGATCG CCAAGGTGCC GCATCTCGGC
GCCGCCGAGG CAACTCAGGC GGTGGAGGCT GCCGCGCAGG CGTTCCCGGC CTGGGCGAAG
CTCACCGCCA AGCAGCGCTC CAACATCTTG CGCAAATGGT TCGAGCTGAT CATTGCCAAC
CGCGAGGATC TGGCTCTGAT CCTGACCTCC GAGCAGGGCA AGCCGCTCAC CGAGGCGCTT
GGCGAAGTCG ATATCGGCGC CGCCTATGTC GAGTTTTTCG CCGAAGAAGC GCGGCGGGTG
TATGGCGAAA CCATCCCGAC CCAGCGCGCC GATGCGCGGC TGATCGCCAT CAAGCAGCCG
ATCGGCGTCT GCGGCGCGAT CACGCCGTGG AATTTCCCGA GTTCGATGAT CACCCGCAAA
GTCTCGCCGG CGCTGGCGGC GGGGTGCACC GTGGTGCTGA AGCCGGCTGA GGAAACGCCG
CTGAGTGCCT TCGCGCTGGC GGCGCTGGCC GAAAAGGCCG GCGTGCCGAA GGGCGTGTTC
AACGTACTCA CCGGCGATGC GCCGGCAATT GGAAAGGTAC TGTGCGAACA TCCGGCCGTC
CGGTTCGTCG GTTTCACCGG CTCCACCGAA GTCGGCAAGA TCCTCTACAA GCAGGCGTCG
GTCGGGGTGA AGAAGCTCGG ATTGGAGCTC GGCGGTAACG CGCCGTTCAT CGTGTTCGAC
GATGCCGATG TCGACGCTGC GGTCGAAGGC GCGATGGTGT CGAAATATCG CAACATGGGC
CAGACTTGCG TTTGCGCCAA TCGGCTCTAC GTGCAGGATG GCGTCTACGA CGCGTTCGTC
GAGAAGCTCG CCGCCAAGGT CAAGGCGATG AAGGTCGGCG ACGGCACCGA GCAGGGCGTC
ACCCAGGGGC CGCTGATCAA TGAGGCCGCC GTCGAGAAGA CCGAGCGGCA CATCGCGGAT
GCGCTATCCA ACGGCGCCAA GATCATCACC GGTGGCAAGC GTCATGCGCT CGGCGGCACC
TTCTTCGAGC CGACCGTGCT GGCCGATGTC CGGCCCGACG CGCTGGTGGC GCATGAAGAA
ACCTTCGGCC CGCTGGCGCC GGTGTTCCGC TTCAAGGACG AAGCCGAAGT GATCAAGCTC
GCCAACGCCT CGCCGTTCGG CCTCGCCAGC TACTTCTACG CCCGCGATTT GGGCCGCGTC
TGGCGCGTTG CCGAGGCGCT GGAGAGCGGC ATGGTCGGCG TCAACACCGG CCTGATCACC
ACCGAAGTCG CCCCGTTCGG CGGCGTCAAG GAATCCGGCC TCGGCCGCGA AGGCTCACAT
CACGGCATCG AGGAGTATGT CGAGATCAAA TACGTGATGA TGGCGGGGAT CTGA
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| Protein sequence | MSPTAAARAA DQAGSLRDRL KDPSLLREQC YIDGAWSGTS TIAVTNPARG QTIAKVPHLG
AAEATQAVEA AAQAFPAWAK LTAKQRSNIL RKWFELIIAN REDLALILTS EQGKPLTEAL
GEVDIGAAYV EFFAEEARRV YGETIPTQRA DARLIAIKQP IGVCGAITPW NFPSSMITRK
VSPALAAGCT VVLKPAEETP LSAFALAALA EKAGVPKGVF NVLTGDAPAI GKVLCEHPAV
RFVGFTGSTE VGKILYKQAS VGVKKLGLEL GGNAPFIVFD DADVDAAVEG AMVSKYRNMG
QTCVCANRLY VQDGVYDAFV EKLAAKVKAM KVGDGTEQGV TQGPLINEAA VEKTERHIAD
ALSNGAKIIT GGKRHALGGT FFEPTVLADV RPDALVAHEE TFGPLAPVFR FKDEAEVIKL
ANASPFGLAS YFYARDLGRV WRVAEALESG MVGVNTGLIT TEVAPFGGVK ESGLGREGSH
HGIEEYVEIK YVMMAGI
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