| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0453 |
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| Symbol | |
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| ID | 6408101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 488867 |
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| End bp | 489526 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710365 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_001989489 |
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| Protein GI | 192288884 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTCCCG AACTTGTTAT TTTCGATTGT GACGGTGTCC TGGTCGACAG TGAGCTGATC
TCCTGTCGGA TTCACGCCGA GACGCTGACC CGCTACGGCT ATCCGATCAC GCCGGACCAA
GTCGCGGCGC GCTTCCTCGG CCGTTCGGGC CGCGAAGCCC GGCGCGAGAT CGAAGCCGAG
ATTGGCCGGC GCTTCGCCGA CGACATCGAA GCAAACCTGC TCGACGCGCT GCTGCGCGCT
TTCGCCGAAA CGTTGCAGCC GATCCCATTC GTCACCGACG CTCTCGACAC GCTTGGACGA
CCGTTCTGCG TCGCCTCGAG CGGCACGCTC GATCGCATCG GGGTGGCGCT GACCCATGCC
GGCCTGCATG CCCGGTTCGC CCCGCATCTG TTTTCGGCCC AGCAGGTCGC GCACGGCAAA
CCGGCGCCCG ACCTGTTCCT GTTCGCGGCG GCCCAGATGG GCGCAGCCCC GGAGCGCTGC
GTGGTGATCG AAGACAGCGT GCCCGGGGTG CTGGGTGCGA AAGCGGCCGG CATGACCGTG
CTCGGTTTTC ACGGCGGCAG TCATTGCACC GATGCTACTG CCGCCGCACT GGCCGCTGCC
GGGGCCGACC GCTGTTTTGA CGACATGAGA CAATTAACTG AAATAATTGA AGAAATTTAG
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| Protein sequence | MTPELVIFDC DGVLVDSELI SCRIHAETLT RYGYPITPDQ VAARFLGRSG REARREIEAE
IGRRFADDIE ANLLDALLRA FAETLQPIPF VTDALDTLGR PFCVASSGTL DRIGVALTHA
GLHARFAPHL FSAQQVAHGK PAPDLFLFAA AQMGAAPERC VVIEDSVPGV LGAKAAGMTV
LGFHGGSHCT DATAAALAAA GADRCFDDMR QLTEIIEEI
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