| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0452 |
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| Symbol | |
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| ID | 6408100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 487356 |
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| End bp | 488747 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710364 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_001989488 |
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| Protein GI | 192288883 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCCGC CGCGCAAGCT GCACATCAAG TCATACGGCT GTCAGATGAA TGTCTACGAT
GCTCAGCGCA TGGTGGATGC GCTGGCGCCG GAAGGCTTTG TCGAGACCGC GAACGTGGAT
GACGCCGACC TGGTGATCCT GAACACCTGC CACATCCGCG AAAAAGCGTC CGAGAAGGTC
TATTCCGAGC TCGGCCGGCT GCGCGTCGCG CGCGACGAAG CCGCAAACCA TGGCCGGCGG
ATGCAGATCG CGGTCGCCGG ATGCGTAGCG CAGGCGGAGG GCGAGGAAAT CATCCGCCGC
GCGCCAGTGG TCGACGTCGT GGTCGGGCCG CAGAGCTATC ACAACCTGCC GCAATTGCTG
GCAAAGGCCG AGCAGCACGG CCGAGCGCTG GAGACCGAGT TCCCGATCGA GGACAAGTTT
GGCGTGTTGC CGCAGCCGGC GCCGGACGCG ATCCGTGCCC GCGGCATTTC GGCGTTCGTG
ACTGTCCAGG AAGGCTGCGA CAAATTCTGC ACCTTCTGCG TCGTGCCCTA TACCCGCGGC
GCCGAGATGT CGCGCCCGGT GGTGGCGATC GTCGAGGACG TCAAACGGCT CGCCGAGAAC
GGGGTCCGCG AGGTCACGCT GATCGGCCAG AACGTCAATG CCTATCACGG CGACGGGCCG
GACGGGCGCG CCTGGTCGCT CGGGCGCCTG GTGCGGCGCC TTGCCGAAAT TCCCGGTATC
GTCCGGCTGC GCTACTCGAC CAGCCATCCA AACGACGTCG ACGATGATCT CTTGGCCGCG
CACCGCGATC TGCCGGCGCT GATGCCGTTC GTGCATCTGC CGGTGCAGTC CGGCTCGGAC
CGGATCTTGG CGGCGATGAA CCGCAAGCAC ACCGCCGACG ATTATCGCCG CGTGATCGAC
CGGTTCCGGT CTGCCTCCGA GACGATCGCA TTCTCGTCCG ACTTCATCGT CGGTTTCCCG
GGTGAAACCG AGCGCGATTT TTCCGCAACT CTCGCGCTTG TCGCACAAAT CGGATACGCT
GGGGCGTATT CGTTCAAATA CTCCCCGCGG CCCGGCACGC CCGCGGCGGA CATGGTGGAG
ATGGTGCCTG CAGCGGTCAT GGACGAGCGG TTGGAGCAGC TCCAGCAATT GATCGACCAG
CAGCAATCGG CCTTCAACAA GGCTGCGATC GGCCGGACCG TGGAGGTCCT GTTCGAGCGC
GCCGGCCGCA AGCCCGGTCA GATCGTCGGC CGCACCGCTT ATCTGCAGCC CGCCCATGTG
ATGGCGCCCG ACAGCATCAT CGGAAAGGTG CTGCCGGTCC GCGTCGATAG CCTCGAACGC
TACAGTCTGC TTGGCGAACT CGCATCCGCA ACCTCCCGGC CGGCCGATGC GATGGCCGCC
ACAGGAGCCT GA
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| Protein sequence | MSPPRKLHIK SYGCQMNVYD AQRMVDALAP EGFVETANVD DADLVILNTC HIREKASEKV
YSELGRLRVA RDEAANHGRR MQIAVAGCVA QAEGEEIIRR APVVDVVVGP QSYHNLPQLL
AKAEQHGRAL ETEFPIEDKF GVLPQPAPDA IRARGISAFV TVQEGCDKFC TFCVVPYTRG
AEMSRPVVAI VEDVKRLAEN GVREVTLIGQ NVNAYHGDGP DGRAWSLGRL VRRLAEIPGI
VRLRYSTSHP NDVDDDLLAA HRDLPALMPF VHLPVQSGSD RILAAMNRKH TADDYRRVID
RFRSASETIA FSSDFIVGFP GETERDFSAT LALVAQIGYA GAYSFKYSPR PGTPAADMVE
MVPAAVMDER LEQLQQLIDQ QQSAFNKAAI GRTVEVLFER AGRKPGQIVG RTAYLQPAHV
MAPDSIIGKV LPVRVDSLER YSLLGELASA TSRPADAMAA TGA
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