| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0446 |
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| Symbol | trmB |
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| ID | 6408094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 481476 |
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| End bp | 482273 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642710358 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_001989482 |
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| Protein GI | 192288877 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGGTCC TGTATGCAGG GCGGCCGGTG CAGAAGTGCG AGCGCAGTCG TTTGATGTTC
AATATTGATC AACCAGACTC GGCGCCGGAC AACGAAGATC ACGATGGCGA CGTCGTGATG
CACGGCCAGG GATCGTTCTT CGGCCGACGT AAGGGCCACA AGCTGCGTGC TCATCAGGCC
GACCTGATCG AGAACCTGCT GCCGCACCTG TCGCTGCAGA TCGACTCGCC GGCGCCCGAA
CCGCTCACCA CATTGTTCGA TCTCCCGGTC GAGCACATGC GCCTCGAAAT CGGTTTCGGC
GGTGGTGAAC ACCTGATCGC CGAAGCGCTT GCTCATCCAG ACACGGGCTT CATCGGCGCC
GAGCCTTACG TCAACGGCAT GGCTAAGATT CTGGCGCGGA TCGAGGCCGA GAATATCCGC
AACATCCGGC TGTTCGCCGG AGACGCCTCG GAACTGCTGG CCTGGGTACC GGCCGGCTCA
CTGGCGCGGA TCGACCTGAT CCATCCCGAT CCGTGGCCGA AGCGGCGACA CTGGAAGCGT
CGCTTCGTGC AGGACGCCAC CGTCGCGGCG ATGGCGCGCG CGCTGACACC GCACGGCGAA
TTCCGCTTCG TCTGCGACAT CGACGGCTAC ACTGCCTGGA CGCTGGCGCA TCTGCTGCGC
GCGCCCTGCT TCGACTGGCT CGCCCAGCGT GCCGATGATT GGCGTAAGCC GTGGCCCAAC
TACACGATGA CGCGCTACGG CCGCAAAGCC GAACGCGAGG GCCGACGCGC CAACTACCTG
CGTTTCGAAC GACTCTAA
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| Protein sequence | MAVLYAGRPV QKCERSRLMF NIDQPDSAPD NEDHDGDVVM HGQGSFFGRR KGHKLRAHQA
DLIENLLPHL SLQIDSPAPE PLTTLFDLPV EHMRLEIGFG GGEHLIAEAL AHPDTGFIGA
EPYVNGMAKI LARIEAENIR NIRLFAGDAS ELLAWVPAGS LARIDLIHPD PWPKRRHWKR
RFVQDATVAA MARALTPHGE FRFVCDIDGY TAWTLAHLLR APCFDWLAQR ADDWRKPWPN
YTMTRYGRKA EREGRRANYL RFERL
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