| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0442 |
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| Symbol | nusA |
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| ID | 6408090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 476678 |
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| End bp | 478291 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710354 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001989478 |
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| Protein GI | 192288873 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGTCA GCGCCAATAG GCTGGAACTG CTGCAGATCG CCGATGCGGT GGCTCGCGAG
AAAACCATCG ACCGCAGCAT CGTGATTGCG GCGATGGAAG ATGCGATCGC CAAGGCGGCG
CGCGCCCGCT ACGGCTCGGA GACCGACGTC CATGCTGAGA TCGACCCGAA GAAGGGCGAG
CTGCGGCTGT CGCGCCACAT GCTGGTGGTC GAGCAGGTCG AAAACCCCGC CAACCAGATT
TCGCTGAAGG ACGCGCAGCG CGCCAATCCC GGCGCGCAGA TCGGCGACAC CATCGCCGAC
ACCCTGCCGC CGCTGGAATA CGGCCGTATC GCCGCGCAGT CGGCCAAGCA GGTGATCGTG
CAGAAGGTCC GTGAGGCCGA GCGCGACCGC CAGTACATGG AATTCAAGGA CCGGATCGGC
GACATCGTCA ACGGCGTCGT CAAGCGCGTC GAATACGGCA GCGTGATCGT CGACCTTGGC
CGCGGCGAAG CGATCATCCG CCGCGACGAG ATGCTGCCGC GTGAGTCGTT CCGCAACGGC
GACCGCGTCC GCGCCTATGT GTTCGACGTC CGCCGCGAGA CCCGCGGCCC GCAGATCTTC
CTGTCGCGCA CCCATCCGCA GTTCATGGCC AAGCTGTTCG CGCAGGAAGT GCCGGAAATC
TACGACGGCA TCGTCGAGAT CAAGGCGGTC GCCCGCGATC CCGGCTCGCG CGCCAAGATC
GGCGTCGTCT CGCGGGACTC CTCGGTCGAT CCGGTCGGCG CCTGCGTCGG TATGCGCGGT
TCGCGCGTGC AGGCGGTGGT GAACGAACTG CAGGGCGAGA AGATCGACAT CATTCCGTGG
TCGCCGGACA TCGCCACCTT CGTGGTCAAC GCGCTGGCGC CGGCCGAAGT CTCGAAGGTC
GTGATCGACG AAGATCGCGA ACGCATCGAG GTTGTGGTTC CGGATACCAA TAACCAACTA
TCCCTGGCGA TTGGTCGCCG CGGTCAGAAC GTGCGGCTCG CTTCGCAGCT CACCGGCTGG
GACATCGACA TCCTGACCGA GAGCGAGGAA TCCGAGCGCC GCCAAGCCGA CTTCGAGAAG
ACCACCCGGG CCTTCATGGA CGCGCTGAAC GTCGACGAGG TCGTCGGCCA GCTGCTCGCC
TCCGAAGGTT TCACCTCGGT CGAAGAACTG GCGCTGGTCG ACCCGCGCGA ACTCGCCTCG
ATCGAAGGTT TCGACGAGGA AACCGCCGCC GAACTGCAGA CCCGCGCCAG CGAATATCTC
GACCGGATTG AATCCGAGCT CGAGGCCCGG CGCCTGGAGC TCGGCGTCGA AGATGCTCTG
AAGGACGTTC CCGGCGTCAC CTCGAAGATG CTGGTCAAGT TCGGCGAGAA CGACGTCAAG
ACCGTCGAGG ATCTGGCCGG CTGCGCCACC GACGATCTGG TGGGTTGGAC CGAGCGCAAG
GACGGCGCCG AGCCGGTGAA GTATCCTGGC ATTCTCGACG GCATGGAGAT GTCGCGCGAG
GACGCCGAAC ACCTGATCAT GCAGGCCCGC GTCAAGGCCG GCTGGATCGA CGAGTCGGAG
CTCGCCTCCG AAGAAGAACC CGCGGACGAA GCGTCCGACG AGTCGGCGGA CTGA
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| Protein sequence | MAVSANRLEL LQIADAVARE KTIDRSIVIA AMEDAIAKAA RARYGSETDV HAEIDPKKGE
LRLSRHMLVV EQVENPANQI SLKDAQRANP GAQIGDTIAD TLPPLEYGRI AAQSAKQVIV
QKVREAERDR QYMEFKDRIG DIVNGVVKRV EYGSVIVDLG RGEAIIRRDE MLPRESFRNG
DRVRAYVFDV RRETRGPQIF LSRTHPQFMA KLFAQEVPEI YDGIVEIKAV ARDPGSRAKI
GVVSRDSSVD PVGACVGMRG SRVQAVVNEL QGEKIDIIPW SPDIATFVVN ALAPAEVSKV
VIDEDRERIE VVVPDTNNQL SLAIGRRGQN VRLASQLTGW DIDILTESEE SERRQADFEK
TTRAFMDALN VDEVVGQLLA SEGFTSVEEL ALVDPRELAS IEGFDEETAA ELQTRASEYL
DRIESELEAR RLELGVEDAL KDVPGVTSKM LVKFGENDVK TVEDLAGCAT DDLVGWTERK
DGAEPVKYPG ILDGMEMSRE DAEHLIMQAR VKAGWIDESE LASEEEPADE ASDESAD
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