| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0435 |
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| Symbol | |
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| ID | 6408083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 466755 |
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| End bp | 468437 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642710347 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_001989471 |
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| Protein GI | 192288866 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.617966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTCCT TCACCCGCTC TGCCGGCCAT GATCATGCGG CAGCGATGCT CGCGGCGCTC
AATCGCTCCC AGGCGGTGAT CGAGTTTGAT CTGGACGGCA ACGTCATCGA CGCAAACGAC
AACTTTCTGA CCGCGCTCGG CTACTCGCTT CCAGAGATCA AGGGCAAGCA TCACCGGATG
TTCGTCGATC CGAGCGAGCA CGACAGCACA GCCTATCGCG AGTTCTGGAC CGCGTTGCGC
ACCGGCCAGT ATCAAGCCGG CGAATTCCAC CGCATCGGCA AGGGCGGCCG CGAGGTCTGG
ATCCAGGCGT CCTACAACCC GATCCTCGAC AAGAACGGCA AACCGACCGG CGTCGTGAAG
TTCGCGGCCG ACATCACCGC GGCCAAGACC CAATCGCTGG AGGATGCCGG CAAGCTCGCG
GCAATCGGCC GCGCTCAGGC GGTGATCGAG TTTGCGATGG ACGGCACCGT CCTCACCGCC
AACGATAACT TTCTCGCCGC GATGGAGTAC TCGCTTGGCG AGATCAAGGG CAAGCATCAC
AGCATGTTTG TCGAGCCGTC GGTGCGCGAG AGCAGCGACT ACCGCGAATT TTGGGCGCGG
CTCAACCGCG GCGAATACTT CCCCGGCGAG TTCAAGCGGA TCGGCAAGGG CGGCAAGGAG
GTCTGGATTC TGGCGTCCTA CAACCCGATC CTCGACGCAC GCGGCAAGCC GTTCAAAGTG
GTGAAATACG CCACCGACGT CACCGCTCAG AAGCTGAAGA ACGCCGACTT CTCCGGCCAG
ATCGATGCGA TCCGCAAGTC ACAGGCGGTG ATCGAATTCA GCATCGACGG CACGGTGCTG
GACGCCAACG ACAACTTCCT GCACGCGCTG GGCTACTCGC TGGGCGAGAT CAAGGGCCGG
CATCACAGTA TTTTCATCGA CCCCGCCGAG CGCGAGAGCG CGGCCTATCG GGCATTCTGG
GCGGCGCTCG GTCGCGGCGA TTATCAGGCC GGCGAATACA AGCGCATCGG CAAAGGCGGC
AGGGAAGTCT GGATCCAGGC CTCCTACAAC CCGATCCTCG ACCTCAATGG GCGGCCTTTC
AAGGTGGTGA AATACGCCGC CGACACCACC CGCCAGGTAC TCACCCGGCT CGGCAACGAG
CGCGTCCGCG CCATGATGGA ATCGGTCGCG GCCGGAGCGG AGGAGCTGAA CGCTTCGGTA
CGCGAGATCT CCGAAGCGAT GACCAAGTCG AGGCAGACAG CGATGAACGC CGTCGGCGAA
GTCGATGCAG CCGACTCTCA GGCCAATCAG CTCAACGACG CGGCTCAAGC AATGAGCGGC
ATCGTCGAAC TGATCAACCA CATCACCGGG CAGATCAATC TGCTGGCGCT CAACGCCACG
ATCGAGTCGG CGCGCGCCGG CGAGGCCGGG CGCGGCTTTG CTGTGGTGGC GGCGGAGGTG
AAGAACCTCG CCAATCAGGC CAAGCAGGCC ACCGACAAGA TCGGGACCGA GATCAGCAAT
CTCACCAGCG TCTCCGGCGA CGTGGTCGGC GCGCTCGGCA AGATCAAGAG CGCGATCCAG
AACGTCAGCG AGTACGTCAG CTCGACGGCT GCGGCGGTGG AGGAGCAGAG CACGGTGACC
AGCGAGATGT CGTCGAGCAT GCAGCGCGCC GCCGCAGAAG CGGCCGCGAT CGCAGCCGGC
TAA
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| Protein sequence | MFSFTRSAGH DHAAAMLAAL NRSQAVIEFD LDGNVIDAND NFLTALGYSL PEIKGKHHRM
FVDPSEHDST AYREFWTALR TGQYQAGEFH RIGKGGREVW IQASYNPILD KNGKPTGVVK
FAADITAAKT QSLEDAGKLA AIGRAQAVIE FAMDGTVLTA NDNFLAAMEY SLGEIKGKHH
SMFVEPSVRE SSDYREFWAR LNRGEYFPGE FKRIGKGGKE VWILASYNPI LDARGKPFKV
VKYATDVTAQ KLKNADFSGQ IDAIRKSQAV IEFSIDGTVL DANDNFLHAL GYSLGEIKGR
HHSIFIDPAE RESAAYRAFW AALGRGDYQA GEYKRIGKGG REVWIQASYN PILDLNGRPF
KVVKYAADTT RQVLTRLGNE RVRAMMESVA AGAEELNASV REISEAMTKS RQTAMNAVGE
VDAADSQANQ LNDAAQAMSG IVELINHITG QINLLALNAT IESARAGEAG RGFAVVAAEV
KNLANQAKQA TDKIGTEISN LTSVSGDVVG ALGKIKSAIQ NVSEYVSSTA AAVEEQSTVT
SEMSSSMQRA AAEAAAIAAG
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