Gene Rpal_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0417 
Symbol 
ID6408064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp449315 
End bp450202 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content68% 
IMG OID642710328 
Productbifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 
Protein accessionYP_001989453 
Protein GI192288848 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.940252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCC GGATCATCGA CGGAAAAACC ATCTCGGCCG AGGTGCGCGC CCGCGTCGCC 
GCAGAGGTCA CGCGGCTGAA GACCGACCAC GGCATCACGC CGGGCCTGGC GGTGGTGCTG
GTCGGCAACG ACCCGGCTTC CGAGGTCTAT GTCCGCTCCA AGCACAAGCA GACCCAGGAG
GCCGGCATGG CCTCGTTCGA GCACCGGCTG CCCGCCGACG TGCCGCAGGC CGAGCTGATG
GCGTTGATCG CAAAGCTCAA TGCCGATCCG GCCGTGCACG GCATTCTGGT GCAATTGCCG
CTGCCGAAGG GTCTCGACAG CAACGCGGTG ATCGACGCGA TCGATCCTGC CAAGGATGTC
GACGGCCTCA ACCCGACCAA TGCCGGCCGG CTGGCCTCCG GCCTGTTCGC GCTGACGCCG
TGCACGCCGC TCGGCAGCAT CATCATGGCC AAGACTGTGC ACGCTTCGCT CGAGGGCATG
AACGCGCTGG TGATCGGCCG CTCCAATCTG GTCGGCAAGC CGCTGGTGCA ATTGCTGCTG
AACGAGAACG CCACGGTGAC GATCGCGCAT TCGCGCACCC GCGACCTGCC GGCGCTGTGC
CGCCAGGCCG ATCTGGTGTT CGCGGCGGTC GGTAAGGCCG AGATGGTGAA GGGCGACTGG
ATCAAGCCGG GCGCCACCGT GATCGACGTC GGCATCAACC GCACGCCGGG CAAGGACGGC
GGCAAGGACA AGCTGCTCGG CGACGTCGCC TTCGCCGAGG CCAAGGAGGT TGCCGGCGCC
ATCACCCCGG TGCCCGGCGG CGTCGGCCTG ATGACGGTGG CCTGCCTGCT GGTCAACACC
GTCCGTGCCG CCTGCGCGAT CCACGGCCTG CCTAAGCCGG CGGTGTAA
 
Protein sequence
MTARIIDGKT ISAEVRARVA AEVTRLKTDH GITPGLAVVL VGNDPASEVY VRSKHKQTQE 
AGMASFEHRL PADVPQAELM ALIAKLNADP AVHGILVQLP LPKGLDSNAV IDAIDPAKDV
DGLNPTNAGR LASGLFALTP CTPLGSIIMA KTVHASLEGM NALVIGRSNL VGKPLVQLLL
NENATVTIAH SRTRDLPALC RQADLVFAAV GKAEMVKGDW IKPGATVIDV GINRTPGKDG
GKDKLLGDVA FAEAKEVAGA ITPVPGGVGL MTVACLLVNT VRAACAIHGL PKPAV